Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507477 (uncharacterized LOC100507477)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507477
Atlas_Id 66911
Location 6q24.1  [Link to chromosome band 6q24]
Location_base_pair Starts at 139976319 and ends at 140093721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507477  100507477  uncharacterized LOC100507477
Aliases
GeneCards (Weizmann)LOC100507477
Ensembl hg19 (Hinxton)ENSG00000236013 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236013 [Gene_View]  ENSG00000236013 [Sequence]  chr6:139976319-140093721 [Contig_View]  LOC100507477 [Vega]
ICGC DataPortalENSG00000236013
TCGA cBioPortalLOC100507477
AceView (NCBI)LOC100507477
Genatlas (Paris)LOC100507477
WikiGenes100507477
SOURCE (Princeton)LOC100507477
Genetics Home Reference (NIH)LOC100507477
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507477  -     chr6:139976319-140093721 +  6q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507477  -     6q24.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100507477 - 6q24.1 [CytoView hg19]  LOC100507477 - 6q24.1 [CytoView hg38]
Mapping of homologs : NCBILOC100507477 [Mapview hg19]  LOC100507477 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038188 BU160297 C04468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507477
Cluster EST : UnigeneHs.179213 [ NCBI ]
CGAP (NCI)Hs.179213
Alternative Splicing GalleryENSG00000236013
Gene ExpressionLOC100507477 [ NCBI-GEO ]   LOC100507477 [ EBI - ARRAY_EXPRESS ]   LOC100507477 [ SEEK ]   LOC100507477 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507477 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507477
GTEX Portal (Tissue expression)LOC100507477
Human Protein AtlasENSG00000236013-LOC100507477 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507477
DMDM Disease mutations100507477
Blocks (Seattle)LOC100507477
Human Protein Atlas [tissue]ENSG00000236013-LOC100507477 [tissue]
Protein Interaction databases
FunCoupENSG00000236013
BioGRIDLOC100507477
STRING (EMBL)LOC100507477
ZODIACLOC100507477
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507477
BioCentury BCIQLOC100507477
ClinGenLOC100507477
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507477
Clinical trialLOC100507477
Miscellaneous
canSAR (ICR)LOC100507477 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507477
EVEXLOC100507477
GoPubMedLOC100507477
iHOPLOC100507477
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 14:01:14 CEST 2018

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