Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507506 (uncharacterized LOC100507506)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507506
Atlas_Id 66915
Location 6p25.2  [Link to chromosome band 6p25]
Location_base_pair Starts at 4136072 and ends at 4157385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507506  100507506  uncharacterized LOC100507506
Aliases
GeneCards (Weizmann)LOC100507506
Ensembl hg19 (Hinxton)ENSG00000234817 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234817 [Gene_View]  ENSG00000234817 [Sequence]  chr6:4136072-4157385 [Contig_View]  LOC100507506 [Vega]
ICGC DataPortalENSG00000234817
TCGA cBioPortalLOC100507506
AceView (NCBI)LOC100507506
Genatlas (Paris)LOC100507506
WikiGenes100507506
SOURCE (Princeton)LOC100507506
Genetics Home Reference (NIH)LOC100507506
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507506  -     chr6:4136072-4157385 +  6p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507506  -     6p25.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100507506 - 6p25.2 [CytoView hg19]  LOC100507506 - 6p25.2 [CytoView hg38]
Mapping of homologs : NCBILOC100507506 [Mapview hg19]  LOC100507506 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092451
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507506
Cluster EST : UnigeneHs.665936 [ NCBI ]
CGAP (NCI)Hs.665936
Alternative Splicing GalleryENSG00000234817
Gene ExpressionLOC100507506 [ NCBI-GEO ]   LOC100507506 [ EBI - ARRAY_EXPRESS ]   LOC100507506 [ SEEK ]   LOC100507506 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507506 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507506
GTEX Portal (Tissue expression)LOC100507506
Human Protein AtlasENSG00000234817-LOC100507506 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507506
DMDM Disease mutations100507506
Blocks (Seattle)LOC100507506
Human Protein Atlas [tissue]ENSG00000234817-LOC100507506 [tissue]
Protein Interaction databases
FunCoupENSG00000234817
BioGRIDLOC100507506
STRING (EMBL)LOC100507506
ZODIACLOC100507506
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507506
BioCentury BCIQLOC100507506
ClinGenLOC100507506
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507506
Clinical trialLOC100507506
Miscellaneous
canSAR (ICR)LOC100507506 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507506
EVEXLOC100507506
GoPubMedLOC100507506
iHOPLOC100507506
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 14:01:15 CEST 2018

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