Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507547 (uncharacterized LOC100507547)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507547
Atlas_Id 66920
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32152802 and ends at 32154365 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507547  100507547  uncharacterized LOC100507547
Aliases
GeneCards (Weizmann)LOC100507547
Ensembl hg19 (Hinxton)ENSG00000204314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204314 [Gene_View]  ENSG00000204314 [Sequence]  chr6:32152802-32154365 [Contig_View]  LOC100507547 [Vega]
ICGC DataPortalENSG00000204314
TCGA cBioPortalLOC100507547
AceView (NCBI)LOC100507547
Genatlas (Paris)LOC100507547
WikiGenes100507547
SOURCE (Princeton)LOC100507547
Genetics Home Reference (NIH)LOC100507547
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507547  -     chr6:32152802-32154365 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507547  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblLOC100507547 - 6p21.32 [CytoView hg19]  LOC100507547 - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBILOC100507547 [Mapview hg19]  LOC100507547 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL050203 BQ575835 BX112489 DA277650
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_042283 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)LOC100507547
Cluster EST : UnigeneHs.549204 [ NCBI ]
CGAP (NCI)Hs.549204
Alternative Splicing GalleryENSG00000204314
Gene ExpressionLOC100507547 [ NCBI-GEO ]   LOC100507547 [ EBI - ARRAY_EXPRESS ]   LOC100507547 [ SEEK ]   LOC100507547 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507547 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507547
GTEX Portal (Tissue expression)LOC100507547
Human Protein AtlasENSG00000204314-LOC100507547 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507547
DMDM Disease mutations100507547
Blocks (Seattle)LOC100507547
Human Protein Atlas [tissue]ENSG00000204314-LOC100507547 [tissue]
Protein Interaction databases
FunCoupENSG00000204314
BioGRIDLOC100507547
STRING (EMBL)LOC100507547
ZODIACLOC100507547
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507547
BioCentury BCIQLOC100507547
ClinGenLOC100507547
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507547
Clinical trialLOC100507547
Miscellaneous
canSAR (ICR)LOC100507547 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507547
EVEXLOC100507547
GoPubMedLOC100507547
iHOPLOC100507547
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:01:16 CEST 2018

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