Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507557 (uncharacterized LOC100507557)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507557
Atlas_Id 66924
Location 6q24.3  [Link to chromosome band 6q24]
Location_base_pair Starts at 145814876 and ends at 145886585 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507557  100507557  uncharacterized LOC100507557
Aliases
GeneCards (Weizmann)LOC100507557
Ensembl hg19 (Hinxton)ENSG00000235652 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235652 [Gene_View]  ENSG00000235652 [Sequence]  chr6:145814876-145886585 [Contig_View]  LOC100507557 [Vega]
ICGC DataPortalENSG00000235652
TCGA cBioPortalLOC100507557
AceView (NCBI)LOC100507557
Genatlas (Paris)LOC100507557
WikiGenes100507557
SOURCE (Princeton)LOC100507557
Genetics Home Reference (NIH)LOC100507557
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507557  -     chr6:145814876-145886585 +  6q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507557  -     6q24.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100507557 - 6q24.3 [CytoView hg19]  LOC100507557 - 6q24.3 [CytoView hg38]
Mapping of homologs : NCBILOC100507557 [Mapview hg19]  LOC100507557 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124757 AK311235 BC043592 DB465589 DC313089
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507557
Cluster EST : UnigeneHs.124537 [ NCBI ]
CGAP (NCI)Hs.124537
Alternative Splicing GalleryENSG00000235652
Gene ExpressionLOC100507557 [ NCBI-GEO ]   LOC100507557 [ EBI - ARRAY_EXPRESS ]   LOC100507557 [ SEEK ]   LOC100507557 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507557 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507557
GTEX Portal (Tissue expression)LOC100507557
Human Protein AtlasENSG00000235652-LOC100507557 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507557
DMDM Disease mutations100507557
Blocks (Seattle)LOC100507557
Human Protein Atlas [tissue]ENSG00000235652-LOC100507557 [tissue]
Protein Interaction databases
FunCoupENSG00000235652
BioGRIDLOC100507557
STRING (EMBL)LOC100507557
ZODIACLOC100507557
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507557
BioCentury BCIQLOC100507557
ClinGenLOC100507557
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507557
Clinical trialLOC100507557
Miscellaneous
canSAR (ICR)LOC100507557 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507557
EVEXLOC100507557
GoPubMedLOC100507557
iHOPLOC100507557
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:01:17 CEST 2018

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