Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100507600 (uncharacterized LOC100507600)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100507600
Atlas_Id 66927
Location 2q21.3  [Link to chromosome band 2q21]
Location_base_pair Starts at 135820191 and ends at 135823087 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100507600  100507600  uncharacterized LOC100507600
Aliases
GeneCards (Weizmann)LOC100507600
Ensembl hg19 (Hinxton)ENSG00000226806 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226806 [Gene_View]  chr2:135820191-135823087 [Contig_View]  LOC100507600 [Vega]
ICGC DataPortalENSG00000226806
TCGA cBioPortalLOC100507600
AceView (NCBI)LOC100507600
Genatlas (Paris)LOC100507600
WikiGenes100507600
SOURCE (Princeton)LOC100507600
Genetics Home Reference (NIH)LOC100507600
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100507600  -     chr2:135820191-135823087 +  2q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100507600  -     2q21.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100507600 - 2q21.3 [CytoView hg19]  LOC100507600 - 2q21.3 [CytoView hg38]
Mapping of homologs : NCBILOC100507600 [Mapview hg19]  LOC100507600 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097922
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100507600
Cluster EST : UnigeneHs.662020 [ NCBI ]
CGAP (NCI)Hs.662020
Alternative Splicing GalleryENSG00000226806
Gene ExpressionLOC100507600 [ NCBI-GEO ]   LOC100507600 [ EBI - ARRAY_EXPRESS ]   LOC100507600 [ SEEK ]   LOC100507600 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100507600 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507600
GTEX Portal (Tissue expression)LOC100507600
Human Protein AtlasENSG00000226806-LOC100507600 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100507600
DMDM Disease mutations100507600
Blocks (Seattle)LOC100507600
Human Protein Atlas [tissue]ENSG00000226806-LOC100507600 [tissue]
Protein Interaction databases
FunCoupENSG00000226806
BioGRIDLOC100507600
STRING (EMBL)LOC100507600
ZODIACLOC100507600
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100507600
BioCentury BCIQLOC100507600
ClinGenLOC100507600
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507600
Clinical trialLOC100507600
Miscellaneous
canSAR (ICR)LOC100507600 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100507600
EVEXLOC100507600
GoPubMedLOC100507600
iHOPLOC100507600
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:45:30 CET 2017

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