Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100652999 (uncharacterized LOC100652999)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100652999
Atlas_Id 66951
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53513984 and ends at 53517608 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100652999  100652999  uncharacterized LOC100652999
Aliases
GeneCards (Weizmann)LOC100652999
Ensembl hg19 (Hinxton)ENSG00000257550 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257550 [Gene_View]  chr12:53513984-53517608 [Contig_View]  LOC100652999 [Vega]
ICGC DataPortalENSG00000257550
TCGA cBioPortalLOC100652999
AceView (NCBI)LOC100652999
Genatlas (Paris)LOC100652999
WikiGenes100652999
SOURCE (Princeton)LOC100652999
Genetics Home Reference (NIH)LOC100652999
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100652999  -     chr12:53513984-53517608 +  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100652999  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblLOC100652999 - 12q13.13 [CytoView hg19]  LOC100652999 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBILOC100652999 [Mapview hg19]  LOC100652999 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027179 BC073920
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100652999
Cluster EST : UnigeneHs.633602 [ NCBI ]
CGAP (NCI)Hs.633602
Alternative Splicing GalleryENSG00000257550
Gene ExpressionLOC100652999 [ NCBI-GEO ]   LOC100652999 [ EBI - ARRAY_EXPRESS ]   LOC100652999 [ SEEK ]   LOC100652999 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100652999 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652999
GTEX Portal (Tissue expression)LOC100652999
Human Protein AtlasENSG00000257550-LOC100652999 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100652999
DMDM Disease mutations100652999
Blocks (Seattle)LOC100652999
Human Protein Atlas [tissue]ENSG00000257550-LOC100652999 [tissue]
Protein Interaction databases
FunCoupENSG00000257550
BioGRIDLOC100652999
STRING (EMBL)LOC100652999
ZODIACLOC100652999
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100652999
BioCentury BCIQLOC100652999
ClinGenLOC100652999
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652999
Clinical trialLOC100652999
Miscellaneous
canSAR (ICR)LOC100652999 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100652999
EVEXLOC100652999
GoPubMedLOC100652999
iHOPLOC100652999
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:02:27 CET 2017

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