Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100996349 (testis expressed 264, ER-phagy receptor)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100996349
Atlas_Id 66964
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22608016 and ends at 22608501 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100996349    testis expressed 264, ER-phagy receptor
Aliases
GeneCards (Weizmann)LOC100996349
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:22608016-22608501 [Contig_View]  LOC100996349 [Vega]
TCGA cBioPortalLOC100996349
AceView (NCBI)LOC100996349
Genatlas (Paris)LOC100996349
SOURCE (Princeton)LOC100996349
Genetics Home Reference (NIH)LOC100996349
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100996349  -     chr19:22608016-22608501 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100996349  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathLOC100996349 - 19p12 [CytoView hg19]  LOC100996349 - 19p12 [CytoView hg38]
Genome Data Viewer NCBILOC100996349 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA975442 AI299044
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100996349
Gene ExpressionLOC100996349 [ NCBI-GEO ]   LOC100996349 [ EBI - ARRAY_EXPRESS ]   LOC100996349 [ SEEK ]   LOC100996349 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100996349 [ Firebrowse - Broad ]
GenevisibleExpression of LOC100996349 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100996349
GTEX Portal (Tissue expression)LOC100996349
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100996349
Protein Interaction databases
BioGRIDLOC100996349
STRING (EMBL)LOC100996349
ZODIACLOC100996349
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC100996349
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun Jan 16 19:05:05 CET 2022

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