Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100996549 (uncharacterized LOC100996549)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100996549
Atlas_Id 77596
Location 2p25.1  [Link to chromosome band 2p25]
Location_base_pair Starts at 9757496 and ends at 9770341 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100996549  100996549  uncharacterized LOC100996549
Aliases
GeneCards (Weizmann)LOC100996549
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:9757496-9770341 [Contig_View]  LOC100996549 [Vega]
TCGA cBioPortalLOC100996549
AceView (NCBI)LOC100996549
Genatlas (Paris)LOC100996549
WikiGenes100996549
SOURCE (Princeton)LOC100996549
Genetics Home Reference (NIH)LOC100996549
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100996549  -     chr2:9757496-9770341 -  2p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100996549  -     2p25.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100996549 - 2p25.1 [CytoView hg19]  LOC100996549 - 2p25.1 [CytoView hg38]
Mapping of homologs : NCBILOC100996549 [Mapview hg19]  LOC100996549 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094576
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100996549
Cluster EST : UnigeneHs.588077 [ NCBI ]
CGAP (NCI)Hs.588077
Gene ExpressionLOC100996549 [ NCBI-GEO ]   LOC100996549 [ EBI - ARRAY_EXPRESS ]   LOC100996549 [ SEEK ]   LOC100996549 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100996549 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996549
GTEX Portal (Tissue expression)LOC100996549
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100996549
DMDM Disease mutations100996549
Blocks (Seattle)LOC100996549
Protein Interaction databases
BioGRIDLOC100996549
STRING (EMBL)LOC100996549
ZODIACLOC100996549
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100996549
BioCentury BCIQLOC100996549
ClinGenLOC100996549
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996549
Clinical trialLOC100996549
Miscellaneous
canSAR (ICR)LOC100996549 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100996549
EVEXLOC100996549
GoPubMedLOC100996549
iHOPLOC100996549
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:45:42 CET 2017

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