Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927136 (uncharacterized LOC101927136)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927136
Atlas_Id 67062
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 53561289 and ends at 53573275 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927136  101927136  uncharacterized LOC101927136
Aliases
GeneCards (Weizmann)LOC101927136
Ensembl hg19 (Hinxton)ENSG00000231683 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231683 [Gene_View]  ENSG00000231683 [Sequence]  chr6:53561289-53573275 [Contig_View]  LOC101927136 [Vega]
ICGC DataPortalENSG00000231683
TCGA cBioPortalLOC101927136
AceView (NCBI)LOC101927136
Genatlas (Paris)LOC101927136
WikiGenes101927136
SOURCE (Princeton)LOC101927136
Genetics Home Reference (NIH)LOC101927136
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927136  -     chr6:53561289-53573275 -  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927136  -     6p12.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927136 - 6p12.1 [CytoView hg19]  LOC101927136 - 6p12.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927136 [Mapview hg19]  LOC101927136 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125128 AK126334 BC050580
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927136
Cluster EST : UnigeneHs.509788 [ NCBI ]
CGAP (NCI)Hs.509788
Alternative Splicing GalleryENSG00000231683
Gene ExpressionLOC101927136 [ NCBI-GEO ]   LOC101927136 [ EBI - ARRAY_EXPRESS ]   LOC101927136 [ SEEK ]   LOC101927136 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927136 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927136
GTEX Portal (Tissue expression)LOC101927136
Human Protein AtlasENSG00000231683-LOC101927136 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927136
DMDM Disease mutations101927136
Blocks (Seattle)LOC101927136
Human Protein Atlas [tissue]ENSG00000231683-LOC101927136 [tissue]
Protein Interaction databases
FunCoupENSG00000231683
BioGRIDLOC101927136
STRING (EMBL)LOC101927136
ZODIACLOC101927136
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927136
BioCentury BCIQLOC101927136
ClinGenLOC101927136
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927136
Clinical trialLOC101927136
Miscellaneous
canSAR (ICR)LOC101927136 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927136
EVEXLOC101927136
GoPubMedLOC101927136
iHOPLOC101927136
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:01:55 CEST 2018

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