Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC101927143 (uncharacterized LOC101927143)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927143
Atlas_Id 67066
Location 1q42.11  [Link to chromosome band 1q42]
Location_base_pair Starts at 224208748 and ends at 224213279 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927143  101927143  uncharacterized LOC101927143
Aliases
GeneCards (Weizmann)LOC101927143
Ensembl hg19 (Hinxton)ENSG00000232628 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232628 [Gene_View]  chr1:224208748-224213279 [Contig_View]  LOC101927143 [Vega]
ICGC DataPortalENSG00000232628
TCGA cBioPortalLOC101927143
AceView (NCBI)LOC101927143
Genatlas (Paris)LOC101927143
WikiGenes101927143
SOURCE (Princeton)LOC101927143
Genetics Home Reference (NIH)LOC101927143
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927143  -     chr1:224208748-224213279 -  1q42.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927143  -     1q42.11   [Description]    (hg19-Feb_2009)
EnsemblLOC101927143 - 1q42.11 [CytoView hg19]  LOC101927143 - 1q42.11 [CytoView hg38]
Mapping of homologs : NCBILOC101927143 [Mapview hg19]  LOC101927143 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC008027
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927143
Cluster EST : UnigeneHs.638720 [ NCBI ]
CGAP (NCI)Hs.638720
Alternative Splicing GalleryENSG00000232628
Gene ExpressionLOC101927143 [ NCBI-GEO ]   LOC101927143 [ EBI - ARRAY_EXPRESS ]   LOC101927143 [ SEEK ]   LOC101927143 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927143 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927143
GTEX Portal (Tissue expression)LOC101927143
Human Protein AtlasENSG00000232628-LOC101927143 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927143
DMDM Disease mutations101927143
Blocks (Seattle)LOC101927143
Human Protein Atlas [tissue]ENSG00000232628-LOC101927143 [tissue]
Protein Interaction databases
FunCoupENSG00000232628
BioGRIDLOC101927143
STRING (EMBL)LOC101927143
ZODIACLOC101927143
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927143
BioCentury BCIQLOC101927143
ClinGenLOC101927143
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927143
Clinical trialLOC101927143
Miscellaneous
canSAR (ICR)LOC101927143 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927143
EVEXLOC101927143
GoPubMedLOC101927143
iHOPLOC101927143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:49:46 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.