Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927189 (uncharacterized LOC101927189)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927189
Atlas_Id 67078
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 53929982 and ends at 53997667 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927189  101927189  uncharacterized LOC101927189
Aliases
GeneCards (Weizmann)LOC101927189
Ensembl hg19 (Hinxton)ENSG00000236740 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236740 [Gene_View]  ENSG00000236740 [Sequence]  chr6:53929982-53997667 [Contig_View]  LOC101927189 [Vega]
ICGC DataPortalENSG00000236740
TCGA cBioPortalLOC101927189
AceView (NCBI)LOC101927189
Genatlas (Paris)LOC101927189
WikiGenes101927189
SOURCE (Princeton)LOC101927189
Genetics Home Reference (NIH)LOC101927189
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927189  -     chr6:53929982-53997667 +  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927189  -     6p12.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927189 - 6p12.1 [CytoView hg19]  LOC101927189 - 6p12.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927189 [Mapview hg19]  LOC101927189 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056584 BX640790
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927189
Cluster EST : UnigeneHs.453592 [ NCBI ]
CGAP (NCI)Hs.453592
Alternative Splicing GalleryENSG00000236740
Gene ExpressionLOC101927189 [ NCBI-GEO ]   LOC101927189 [ EBI - ARRAY_EXPRESS ]   LOC101927189 [ SEEK ]   LOC101927189 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927189 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927189
GTEX Portal (Tissue expression)LOC101927189
Human Protein AtlasENSG00000236740-LOC101927189 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927189
DMDM Disease mutations101927189
Blocks (Seattle)LOC101927189
Human Protein Atlas [tissue]ENSG00000236740-LOC101927189 [tissue]
Protein Interaction databases
FunCoupENSG00000236740
BioGRIDLOC101927189
STRING (EMBL)LOC101927189
ZODIACLOC101927189
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927189
BioCentury BCIQLOC101927189
ClinGenLOC101927189
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927189
Clinical trialLOC101927189
Miscellaneous
canSAR (ICR)LOC101927189 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927189
EVEXLOC101927189
GoPubMedLOC101927189
iHOPLOC101927189
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:01:59 CEST 2018

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