Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC101927272 (uncharacterized LOC101927272)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927272
Atlas_Id 67096
Location 16q12.1  [Link to chromosome band 16q12]
Location_base_pair Starts at 50668855 and ends at 50671639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927272  101927272  uncharacterized LOC101927272
Aliases
GeneCards (Weizmann)LOC101927272
Ensembl hg19 (Hinxton)ENSG00000260249 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260249 [Gene_View]  ENSG00000260249 [Sequence]  chr16:50668855-50671639 [Contig_View]  LOC101927272 [Vega]
ICGC DataPortalENSG00000260249
TCGA cBioPortalLOC101927272
AceView (NCBI)LOC101927272
Genatlas (Paris)LOC101927272
WikiGenes101927272
SOURCE (Princeton)LOC101927272
Genetics Home Reference (NIH)LOC101927272
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927272  -     chr16:50668855-50671639 +  16q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927272  -     16q12.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927272 - 16q12.1 [CytoView hg19]  LOC101927272 - 16q12.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927272 [Mapview hg19]  LOC101927272 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF143871 AL161979
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927272
Cluster EST : UnigeneHs.460777 [ NCBI ]
CGAP (NCI)Hs.460777
Alternative Splicing GalleryENSG00000260249
Gene ExpressionLOC101927272 [ NCBI-GEO ]   LOC101927272 [ EBI - ARRAY_EXPRESS ]   LOC101927272 [ SEEK ]   LOC101927272 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927272 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927272
GTEX Portal (Tissue expression)LOC101927272
Human Protein AtlasENSG00000260249-LOC101927272 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927272
DMDM Disease mutations101927272
Blocks (Seattle)LOC101927272
Human Protein Atlas [tissue]ENSG00000260249-LOC101927272 [tissue]
Protein Interaction databases
FunCoupENSG00000260249
BioGRIDLOC101927272
STRING (EMBL)LOC101927272
ZODIACLOC101927272
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927272
BioCentury BCIQLOC101927272
ClinGenLOC101927272
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927272
Clinical trialLOC101927272
Miscellaneous
canSAR (ICR)LOC101927272 (select the gene name)
DataMed IndexLOC101927272
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927272
EVEXLOC101927272
GoPubMedLOC101927272
iHOPLOC101927272
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Feb 14 15:28:15 CET 2019
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