Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927358 (uncharacterized LOC101927358)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927358
Atlas_Id 67118
Location 9q21.13  [Link to chromosome band 9q21]
Location_base_pair Starts at 74371531 and ends at 74383530 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927358  101927358  uncharacterized LOC101927358
Aliases
GeneCards (Weizmann)LOC101927358
Ensembl hg19 (Hinxton)ENSG00000227809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227809 [Gene_View]  chr9:74371531-74383530 [Contig_View]  LOC101927358 [Vega]
ICGC DataPortalENSG00000227809
TCGA cBioPortalLOC101927358
AceView (NCBI)LOC101927358
Genatlas (Paris)LOC101927358
WikiGenes101927358
SOURCE (Princeton)LOC101927358
Genetics Home Reference (NIH)LOC101927358
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927358  -     chr9:74371531-74383530 +  9q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927358  -     9q21.13   [Description]    (hg19-Feb_2009)
EnsemblLOC101927358 - 9q21.13 [CytoView hg19]  LOC101927358 - 9q21.13 [CytoView hg38]
Mapping of homologs : NCBILOC101927358 [Mapview hg19]  LOC101927358 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC021182
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927358
Cluster EST : UnigeneHs.559523 [ NCBI ]
CGAP (NCI)Hs.559523
Alternative Splicing GalleryENSG00000227809
Gene ExpressionLOC101927358 [ NCBI-GEO ]   LOC101927358 [ EBI - ARRAY_EXPRESS ]   LOC101927358 [ SEEK ]   LOC101927358 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927358 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927358
GTEX Portal (Tissue expression)LOC101927358
Human Protein AtlasENSG00000227809-LOC101927358 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927358
DMDM Disease mutations101927358
Blocks (Seattle)LOC101927358
Human Protein Atlas [tissue]ENSG00000227809-LOC101927358 [tissue]
Protein Interaction databases
FunCoupENSG00000227809
BioGRIDLOC101927358
STRING (EMBL)LOC101927358
ZODIACLOC101927358
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927358
BioCentury BCIQLOC101927358
ClinGenLOC101927358
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927358
Clinical trialLOC101927358
Miscellaneous
canSAR (ICR)LOC101927358 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927358
EVEXLOC101927358
GoPubMedLOC101927358
iHOPLOC101927358
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:49:59 CET 2017

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