Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927394 (uncharacterized LOC101927394)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927394
Atlas_Id 67125
Location 3p26.1  [Link to chromosome band 3p26]
Location_base_pair Starts at 7952805 and ends at 8016307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927394  101927394  uncharacterized LOC101927394
Aliases
GeneCards (Weizmann)LOC101927394
Ensembl hg19 (Hinxton)ENSG00000227110 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227110 [Gene_View]  chr3:7952805-8016307 [Contig_View]  LOC101927394 [Vega]
ICGC DataPortalENSG00000227110
TCGA cBioPortalLOC101927394
AceView (NCBI)LOC101927394
Genatlas (Paris)LOC101927394
WikiGenes101927394
SOURCE (Princeton)LOC101927394
Genetics Home Reference (NIH)LOC101927394
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927394  -     chr3:7952805-8016307 -  3p26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927394  -     3p26.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927394 - 3p26.1 [CytoView hg19]  LOC101927394 - 3p26.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927394 [Mapview hg19]  LOC101927394 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124857
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927394
Cluster EST : UnigeneHs.517767 [ NCBI ]
CGAP (NCI)Hs.517767
Alternative Splicing GalleryENSG00000227110
Gene ExpressionLOC101927394 [ NCBI-GEO ]   LOC101927394 [ EBI - ARRAY_EXPRESS ]   LOC101927394 [ SEEK ]   LOC101927394 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927394 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927394
GTEX Portal (Tissue expression)LOC101927394
Human Protein AtlasENSG00000227110-LOC101927394 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927394
DMDM Disease mutations101927394
Blocks (Seattle)LOC101927394
Human Protein Atlas [tissue]ENSG00000227110-LOC101927394 [tissue]
Protein Interaction databases
FunCoupENSG00000227110
BioGRIDLOC101927394
STRING (EMBL)LOC101927394
ZODIACLOC101927394
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927394
BioCentury BCIQLOC101927394
ClinGenLOC101927394
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927394
Clinical trialLOC101927394
Miscellaneous
canSAR (ICR)LOC101927394 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927394
EVEXLOC101927394
GoPubMedLOC101927394
iHOPLOC101927394
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:03:12 CET 2017

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