Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC101927421 (uncharacterized LOC101927421)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927421
Atlas_Id 67134
Location 5q23.2  [Link to chromosome band 5q23]
Location_base_pair Starts at 125036831 and ends at 125367734 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927421  101927421  uncharacterized LOC101927421
Aliases
GeneCards (Weizmann)LOC101927421
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:125036831-125367734 [Contig_View]  LOC101927421 [Vega]
TCGA cBioPortalLOC101927421
AceView (NCBI)LOC101927421
Genatlas (Paris)LOC101927421
WikiGenes101927421
SOURCE (Princeton)LOC101927421
Genetics Home Reference (NIH)LOC101927421
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927421  -     chr5:125036831-125367734 +  5q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927421  -     5q23.2   [Description]    (hg19-Feb_2009)
EnsemblLOC101927421 - 5q23.2 [CytoView hg19]  LOC101927421 - 5q23.2 [CytoView hg38]
Mapping of homologs : NCBILOC101927421 [Mapview hg19]  LOC101927421 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA758211 BU517015 BX089050
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_187549
Consensus coding sequences : CCDS (NCBI)LOC101927421
Cluster EST : UnigeneHs.638668 [ NCBI ]
CGAP (NCI)Hs.638668
Gene ExpressionLOC101927421 [ NCBI-GEO ]   LOC101927421 [ EBI - ARRAY_EXPRESS ]   LOC101927421 [ SEEK ]   LOC101927421 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927421 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927421
GTEX Portal (Tissue expression)LOC101927421
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927421
DMDM Disease mutations101927421
Blocks (Seattle)LOC101927421
Protein Interaction databases
BioGRIDLOC101927421
STRING (EMBL)LOC101927421
ZODIACLOC101927421
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927421
BioCentury BCIQLOC101927421
ClinGenLOC101927421
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927421
Clinical trialLOC101927421
Miscellaneous
canSAR (ICR)LOC101927421 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927421
EVEXLOC101927421
GoPubMedLOC101927421
iHOPLOC101927421
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:46:25 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.