Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927476 (uncharacterized LOC101927476)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927476
Atlas_Id 67146
Location Xp11.4  [Link to chromosome band Xp11]
Location_base_pair Starts at 40262917 and ends at 40287721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927476  101927476  uncharacterized LOC101927476
Aliases
GeneCards (Weizmann)LOC101927476
Ensembl hg19 (Hinxton)ENSG00000236393 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236393 [Gene_View]  chrX:40262917-40287721 [Contig_View]  LOC101927476 [Vega]
ICGC DataPortalENSG00000236393
TCGA cBioPortalLOC101927476
AceView (NCBI)LOC101927476
Genatlas (Paris)LOC101927476
WikiGenes101927476
SOURCE (Princeton)LOC101927476
Genetics Home Reference (NIH)LOC101927476
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927476  -     chrX:40262917-40287721 +  Xp11.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927476  -     Xp11.4   [Description]    (hg19-Feb_2009)
EnsemblLOC101927476 - Xp11.4 [CytoView hg19]  LOC101927476 - Xp11.4 [CytoView hg38]
Mapping of homologs : NCBILOC101927476 [Mapview hg19]  LOC101927476 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123782
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927476
Cluster EST : UnigeneHs.522607 [ NCBI ]
CGAP (NCI)Hs.522607
Alternative Splicing GalleryENSG00000236393
Gene ExpressionLOC101927476 [ NCBI-GEO ]   LOC101927476 [ EBI - ARRAY_EXPRESS ]   LOC101927476 [ SEEK ]   LOC101927476 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927476 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927476
GTEX Portal (Tissue expression)LOC101927476
Human Protein AtlasENSG00000236393-LOC101927476 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927476
DMDM Disease mutations101927476
Blocks (Seattle)LOC101927476
Human Protein Atlas [tissue]ENSG00000236393-LOC101927476 [tissue]
Protein Interaction databases
FunCoupENSG00000236393
BioGRIDLOC101927476
STRING (EMBL)LOC101927476
ZODIACLOC101927476
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927476
BioCentury BCIQLOC101927476
ClinGenLOC101927476
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927476
Clinical trialLOC101927476
Miscellaneous
canSAR (ICR)LOC101927476 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927476
EVEXLOC101927476
GoPubMedLOC101927476
iHOPLOC101927476
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:46:29 CET 2017

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