Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC101927480 (uncharacterized LOC101927480)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927480
Atlas_Id 78102
Location 16q12.2  [Link to chromosome band 16q12]
Location_base_pair Starts at 54847251 and ends at 54848233 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927480  101927480  uncharacterized LOC101927480
Aliases
GeneCards (Weizmann)LOC101927480
Ensembl hg19 (Hinxton)ENSG00000261171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261171 [Gene_View]  chr16:54847251-54848233 [Contig_View]  LOC101927480 [Vega]
ICGC DataPortalENSG00000261171
TCGA cBioPortalLOC101927480
AceView (NCBI)LOC101927480
Genatlas (Paris)LOC101927480
WikiGenes101927480
SOURCE (Princeton)LOC101927480
Genetics Home Reference (NIH)LOC101927480
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927480  -     chr16:54847251-54848233 -  16q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927480  -     16q12.2   [Description]    (hg19-Feb_2009)
EnsemblLOC101927480 - 16q12.2 [CytoView hg19]  LOC101927480 - 16q12.2 [CytoView hg38]
Mapping of homologs : NCBILOC101927480 [Mapview hg19]  LOC101927480 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW573137 BF510120
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927480
Cluster EST : UnigeneHs.499208 [ NCBI ]
CGAP (NCI)Hs.499208
Alternative Splicing GalleryENSG00000261171
Gene ExpressionLOC101927480 [ NCBI-GEO ]   LOC101927480 [ EBI - ARRAY_EXPRESS ]   LOC101927480 [ SEEK ]   LOC101927480 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927480 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927480
GTEX Portal (Tissue expression)LOC101927480
Human Protein AtlasENSG00000261171-LOC101927480 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927480
DMDM Disease mutations101927480
Blocks (Seattle)LOC101927480
Human Protein Atlas [tissue]ENSG00000261171-LOC101927480 [tissue]
Protein Interaction databases
FunCoupENSG00000261171
BioGRIDLOC101927480
STRING (EMBL)LOC101927480
ZODIACLOC101927480
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927480
BioCentury BCIQLOC101927480
ClinGenLOC101927480
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927480
Clinical trialLOC101927480
Miscellaneous
canSAR (ICR)LOC101927480 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927480
EVEXLOC101927480
GoPubMedLOC101927480
iHOPLOC101927480
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:50:08 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.