Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC101927580 (uncharacterized LOC101927580)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927580
Atlas_Id 67170
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 59889257 and ends at 60087875 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927580  101927580  uncharacterized LOC101927580
Aliases
GeneCards (Weizmann)LOC101927580
Ensembl hg19 (Hinxton)ENSG00000261807 [Gene_View]  chr16:59889257-60087875 [Contig_View]  LOC101927580 [Vega]
Ensembl hg38 (Hinxton)ENSG00000261807 [Gene_View]  chr16:59889257-60087875 [Contig_View]  LOC101927580 [Vega]
ICGC DataPortalENSG00000261807
TCGA cBioPortalLOC101927580
AceView (NCBI)LOC101927580
Genatlas (Paris)LOC101927580
WikiGenes101927580
SOURCE (Princeton)LOC101927580
Genetics Home Reference (NIH)LOC101927580
Genomic and cartography
GoldenPath hg19 (UCSC)LOC101927580  -     chr16:59889257-60087875 +  16q21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC101927580  -     16q21   [Description]    (hg38-Dec_2013)
EnsemblLOC101927580 - 16q21 [CytoView hg19]  LOC101927580 - 16q21 [CytoView hg38]
Mapping of homologs : NCBILOC101927580 [Mapview hg19]  LOC101927580 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR936694 HG508152
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)LOC101927580
Cluster EST : UnigeneHs.552235 [ NCBI ]
CGAP (NCI)Hs.552235
Alternative Splicing GalleryENSG00000261807
Gene ExpressionLOC101927580 [ NCBI-GEO ]   LOC101927580 [ EBI - ARRAY_EXPRESS ]   LOC101927580 [ SEEK ]   LOC101927580 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927580 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927580
GTEX Portal (Tissue expression)LOC101927580
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927580
DMDM Disease mutations101927580
Blocks (Seattle)LOC101927580
Human Protein AtlasENSG00000261807
Protein Interaction databases
FunCoupENSG00000261807
BioGRIDLOC101927580
STRING (EMBL)LOC101927580
ZODIACLOC101927580
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927580
BioCentury BCIQLOC101927580
ClinGenLOC101927580
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927580
Clinical trialLOC101927580
Miscellaneous
canSAR (ICR)LOC101927580 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927580
EVEXLOC101927580
GoPubMedLOC101927580
iHOPLOC101927580
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:18:42 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.