Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927827 (uncharacterized LOC101927827)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927827
Atlas_Id 67224
Location 9p11.1  [Link to chromosome band 9p11]
Location_base_pair Starts at 42579805 and ends at 42586534 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927827  101927827  uncharacterized LOC101927827
Aliases
GeneCards (Weizmann)LOC101927827
Ensembl hg19 (Hinxton)ENSG00000229311 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229311 [Gene_View]  chr9:42579805-42586534 [Contig_View]  LOC101927827 [Vega]
ICGC DataPortalENSG00000229311
TCGA cBioPortalLOC101927827
AceView (NCBI)LOC101927827
Genatlas (Paris)LOC101927827
WikiGenes101927827
SOURCE (Princeton)LOC101927827
Genetics Home Reference (NIH)LOC101927827
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927827  -     chr9:42579805-42586534 -  9p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927827  -     9p11.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927827 - 9p11.1 [CytoView hg19]  LOC101927827 - 9p11.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927827 [Mapview hg19]  LOC101927827 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126080
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927827
Cluster EST : UnigeneHs.738704 [ NCBI ]
CGAP (NCI)Hs.738704
Alternative Splicing GalleryENSG00000229311
Gene ExpressionLOC101927827 [ NCBI-GEO ]   LOC101927827 [ EBI - ARRAY_EXPRESS ]   LOC101927827 [ SEEK ]   LOC101927827 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927827 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927827
GTEX Portal (Tissue expression)LOC101927827
Human Protein AtlasENSG00000229311-LOC101927827 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927827
DMDM Disease mutations101927827
Blocks (Seattle)LOC101927827
Human Protein Atlas [tissue]ENSG00000229311-LOC101927827 [tissue]
Protein Interaction databases
FunCoupENSG00000229311
BioGRIDLOC101927827
STRING (EMBL)LOC101927827
ZODIACLOC101927827
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927827
BioCentury BCIQLOC101927827
ClinGenLOC101927827
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927827
Clinical trialLOC101927827
Miscellaneous
canSAR (ICR)LOC101927827 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927827
EVEXLOC101927827
GoPubMedLOC101927827
iHOPLOC101927827
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:46:52 CET 2017

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