Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101927972 (uncharacterized LOC101927972)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101927972
Atlas_Id 67257
Location 6p25.1  [Link to chromosome band 6p25]
Location_base_pair Starts at 5452468 and ends at 5458075 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101927972  101927972  uncharacterized LOC101927972
Aliases
GeneCards (Weizmann)LOC101927972
Ensembl hg19 (Hinxton)ENSG00000269985 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269985 [Gene_View]  ENSG00000269985 [Sequence]  chr6:5452468-5458075 [Contig_View]  LOC101927972 [Vega]
ICGC DataPortalENSG00000269985
TCGA cBioPortalLOC101927972
AceView (NCBI)LOC101927972
Genatlas (Paris)LOC101927972
WikiGenes101927972
SOURCE (Princeton)LOC101927972
Genetics Home Reference (NIH)LOC101927972
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101927972  -     chr6:5452468-5458075 -  6p25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101927972  -     6p25.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101927972 - 6p25.1 [CytoView hg19]  LOC101927972 - 6p25.1 [CytoView hg38]
Mapping of homologs : NCBILOC101927972 [Mapview hg19]  LOC101927972 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI335178 CB046455 DB135850
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101927972
Cluster EST : UnigeneHs.668417 [ NCBI ]
CGAP (NCI)Hs.668417
Alternative Splicing GalleryENSG00000269985
Gene ExpressionLOC101927972 [ NCBI-GEO ]   LOC101927972 [ EBI - ARRAY_EXPRESS ]   LOC101927972 [ SEEK ]   LOC101927972 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101927972 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927972
GTEX Portal (Tissue expression)LOC101927972
Human Protein AtlasENSG00000269985-LOC101927972 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101927972
DMDM Disease mutations101927972
Blocks (Seattle)LOC101927972
Human Protein Atlas [tissue]ENSG00000269985-LOC101927972 [tissue]
Protein Interaction databases
FunCoupENSG00000269985
BioGRIDLOC101927972
STRING (EMBL)LOC101927972
ZODIACLOC101927972
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101927972
BioCentury BCIQLOC101927972
ClinGenLOC101927972
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927972
Clinical trialLOC101927972
Miscellaneous
canSAR (ICR)LOC101927972 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101927972
EVEXLOC101927972
GoPubMedLOC101927972
iHOPLOC101927972
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:02:52 CEST 2018

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