Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101928333 (uncharacterized LOC101928333)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928333
Atlas_Id 67332
Location 7q31.33  [Link to chromosome band 7q31]
Location_base_pair Starts at 127215127 and ends at 127229921 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101928333  101928333  uncharacterized LOC101928333
Aliases
GeneCards (Weizmann)LOC101928333
Ensembl hg19 (Hinxton)ENSG00000236340 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236340 [Gene_View]  chr7:127215127-127229921 [Contig_View]  LOC101928333 [Vega]
ICGC DataPortalENSG00000236340
TCGA cBioPortalLOC101928333
AceView (NCBI)LOC101928333
Genatlas (Paris)LOC101928333
WikiGenes101928333
SOURCE (Princeton)LOC101928333
Genetics Home Reference (NIH)LOC101928333
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101928333  -     chr7:127215127-127229921 +  7q31.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101928333  -     7q31.33   [Description]    (hg19-Feb_2009)
EnsemblLOC101928333 - 7q31.33 [CytoView hg19]  LOC101928333 - 7q31.33 [CytoView hg38]
Mapping of homologs : NCBILOC101928333 [Mapview hg19]  LOC101928333 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040328 BQ438530
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101928333
Cluster EST : UnigeneHs.551332 [ NCBI ]
CGAP (NCI)Hs.551332
Alternative Splicing GalleryENSG00000236340
Gene ExpressionLOC101928333 [ NCBI-GEO ]   LOC101928333 [ EBI - ARRAY_EXPRESS ]   LOC101928333 [ SEEK ]   LOC101928333 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101928333 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928333
GTEX Portal (Tissue expression)LOC101928333
Human Protein AtlasENSG00000236340-LOC101928333 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101928333
DMDM Disease mutations101928333
Blocks (Seattle)LOC101928333
Human Protein Atlas [tissue]ENSG00000236340-LOC101928333 [tissue]
Protein Interaction databases
FunCoupENSG00000236340
BioGRIDLOC101928333
STRING (EMBL)LOC101928333
ZODIACLOC101928333
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928333
BioCentury BCIQLOC101928333
ClinGenLOC101928333
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928333
Clinical trialLOC101928333
Miscellaneous
canSAR (ICR)LOC101928333 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101928333
EVEXLOC101928333
GoPubMedLOC101928333
iHOPLOC101928333
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:47:29 CET 2017

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