Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101928516 (uncharacterized LOC101928516)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928516
Atlas_Id 67374
Location 6q13  [Link to chromosome band 6q13]
Location_base_pair Starts at 74069451 and ends at 74690727 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101928516  101928516  uncharacterized LOC101928516
Aliases
GeneCards (Weizmann)LOC101928516
Ensembl hg19 (Hinxton)ENSG00000223786 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223786 [Gene_View]  ENSG00000223786 [Sequence]  chr6:74069451-74690727 [Contig_View]  LOC101928516 [Vega]
ICGC DataPortalENSG00000223786
TCGA cBioPortalLOC101928516
AceView (NCBI)LOC101928516
Genatlas (Paris)LOC101928516
WikiGenes101928516
SOURCE (Princeton)LOC101928516
Genetics Home Reference (NIH)LOC101928516
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101928516  -     chr6:74069451-74690727 +  6q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101928516  -     6q13   [Description]    (hg19-Feb_2009)
EnsemblLOC101928516 - 6q13 [CytoView hg19]  LOC101928516 - 6q13 [CytoView hg38]
Mapping of homologs : NCBILOC101928516 [Mapview hg19]  LOC101928516 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086303
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101928516
Cluster EST : UnigeneHs.384600 [ NCBI ]
CGAP (NCI)Hs.384600
Alternative Splicing GalleryENSG00000223786
Gene ExpressionLOC101928516 [ NCBI-GEO ]   LOC101928516 [ EBI - ARRAY_EXPRESS ]   LOC101928516 [ SEEK ]   LOC101928516 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101928516 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928516
GTEX Portal (Tissue expression)LOC101928516
Human Protein AtlasENSG00000223786-LOC101928516 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101928516
DMDM Disease mutations101928516
Blocks (Seattle)LOC101928516
Human Protein Atlas [tissue]ENSG00000223786-LOC101928516 [tissue]
Protein Interaction databases
FunCoupENSG00000223786
BioGRIDLOC101928516
STRING (EMBL)LOC101928516
ZODIACLOC101928516
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928516
BioCentury BCIQLOC101928516
ClinGenLOC101928516
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928516
Clinical trialLOC101928516
Miscellaneous
canSAR (ICR)LOC101928516 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101928516
EVEXLOC101928516
GoPubMedLOC101928516
iHOPLOC101928516
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:03:32 CEST 2018

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