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LOC101928697 (uncharacterized LOC101928697)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928697
Atlas_Id 67409
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 19182033 and ends at 19187465 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101928697  101928697  uncharacterized LOC101928697
Aliases
GeneCards (Weizmann)LOC101928697
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:19182033-19187465 [Contig_View]  LOC101928697 [Vega]
TCGA cBioPortalLOC101928697
AceView (NCBI)LOC101928697
Genatlas (Paris)LOC101928697
WikiGenes101928697
SOURCE (Princeton)LOC101928697
Genetics Home Reference (NIH)LOC101928697
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101928697  -     chr13:19182033-19187465 +  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101928697  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblLOC101928697 - 13q12.11 [CytoView hg19]  LOC101928697 - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBILOC101928697 [Mapview hg19]  LOC101928697 [Mapview hg38]
Gene and transcription
Genbank (Entrez)HY007484 HY191373 HY227817
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101928697
Cluster EST : UnigeneHs.742697 [ NCBI ]
CGAP (NCI)Hs.742697
Gene ExpressionLOC101928697 [ NCBI-GEO ]   LOC101928697 [ EBI - ARRAY_EXPRESS ]   LOC101928697 [ SEEK ]   LOC101928697 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101928697 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928697
GTEX Portal (Tissue expression)LOC101928697
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H521   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H521  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H521
Splice isoforms : SwissVarQ9H521
PhosPhoSitePlusQ9H521
Domains : Interpro (EBI)KELK   
Domain families : Pfam (Sanger)KELK (PF15796)   
Domain families : Pfam (NCBI)pfam15796   
Conserved Domain (NCBI)LOC101928697
DMDM Disease mutations101928697
Blocks (Seattle)LOC101928697
SuperfamilyQ9H521
Peptide AtlasQ9H521
Protein Interaction databases
DIP (DOE-UCLA)Q9H521
IntAct (EBI)Q9H521
BioGRIDLOC101928697
STRING (EMBL)LOC101928697
ZODIACLOC101928697
Ontologies - Pathways
QuickGOQ9H521
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC101928697
Atlas of Cancer Signalling NetworkLOC101928697
Wikipedia pathwaysLOC101928697
Orthology - Evolution
OrthoDB101928697
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ9H521
HOGENOMQ9H521
Homologs : HomoloGeneLOC101928697
Homology/Alignments : Family Browser (UCSC)LOC101928697
Gene fusions - Rearrangements
Tumor Fusion PortalLOC101928697
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC101928697 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC101928697
dbVarLOC101928697
ClinVarLOC101928697
1000_GenomesLOC101928697 
Exome Variant ServerLOC101928697
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP101928697
Genomic Variants (DGV)LOC101928697 [DGVbeta]
DECIPHERLOC101928697 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC101928697 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC101928697
DgiDB (Drug Gene Interaction Database)LOC101928697
DoCM (Curated mutations)LOC101928697 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC101928697 (select a term)
intoGenLOC101928697
Cancer3DLOC101928697(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETLOC101928697
MedgenLOC101928697
Genetic Testing Registry LOC101928697
NextProtQ9H521 [Medical]
TSGene101928697
GENETestsLOC101928697
Target ValidationLOC101928697
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928697
BioCentury BCIQLOC101928697
ClinGenLOC101928697
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928697
Clinical trialLOC101928697
Miscellaneous
canSAR (ICR)LOC101928697 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101928697
EVEXLOC101928697
GoPubMedLOC101928697
iHOPLOC101928697
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:51:26 CET 2017

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