Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC101928728 (collagen alpha-1(III) chain-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928728
Atlas_Id 76875
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 27018623 and ends at 27020622 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101928728  101928728  collagen alpha-1(III) chain-like
Aliases
GeneCards (Weizmann)LOC101928728
Ensembl hg19 (Hinxton) [Gene_View]  chr1:27018623-27020622 [Contig_View]  LOC101928728 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:27018623-27020622 [Contig_View]  LOC101928728 [Vega]
TCGA cBioPortalLOC101928728
AceView (NCBI)LOC101928728
Genatlas (Paris)LOC101928728
WikiGenes101928728
SOURCE (Princeton)LOC101928728
Genetics Home Reference (NIH)LOC101928728
Genomic and cartography
GoldenPath hg19 (UCSC)LOC101928728  -     chr1:27018623-27020622 -  1p36.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC101928728  -     1p36.11   [Description]    (hg38-Dec_2013)
EnsemblLOC101928728 - 1p36.11 [CytoView hg19]  LOC101928728 - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBILOC101928728 [Mapview hg19]  LOC101928728 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033844 HG491805
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929289
Consensus coding sequences : CCDS (NCBI)LOC101928728
Cluster EST : UnigeneHs.128770 [ NCBI ]
CGAP (NCI)Hs.128770
Gene ExpressionLOC101928728 [ NCBI-GEO ]   LOC101928728 [ EBI - ARRAY_EXPRESS ]   LOC101928728 [ SEEK ]   LOC101928728 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101928728 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928728
GTEX Portal (Tissue expression)LOC101928728
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101928728
DMDM Disease mutations101928728
Blocks (Seattle)LOC101928728
Protein Interaction databases
BioGRIDLOC101928728
STRING (EMBL)LOC101928728
ZODIACLOC101928728
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928728
BioCentury BCIQLOC101928728
ClinGenLOC101928728
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928728
Clinical trialLOC101928728
Miscellaneous
canSAR (ICR)LOC101928728 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101928728
EVEXLOC101928728
GoPubMedLOC101928728
iHOPLOC101928728
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:19:57 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.