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LOC101928841 (collagen alpha-1(II) chain-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101928841
Atlas_Id 76741
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113399610 and ends at 113414393 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101928841  101928841  collagen alpha-1(II) chain-like
Aliases
GeneCards (Weizmann)LOC101928841
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:113399610-113414393 [Contig_View]  LOC101928841 [Vega]
TCGA cBioPortalLOC101928841
AceView (NCBI)LOC101928841
Genatlas (Paris)LOC101928841
WikiGenes101928841
SOURCE (Princeton)LOC101928841
Genetics Home Reference (NIH)LOC101928841
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101928841  -     chr13:113399610-113414393 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101928841  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLOC101928841 - 13q34 [CytoView hg19]  LOC101928841 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILOC101928841 [Mapview hg19]  LOC101928841 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036906 BX647655 Z28716
RefSeq transcript (Entrez)NM_001003399 NM_001304433
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101928841
Cluster EST : UnigeneHs.646609 [ NCBI ]
CGAP (NCI)Hs.646609
Gene ExpressionLOC101928841 [ NCBI-GEO ]   LOC101928841 [ EBI - ARRAY_EXPRESS ]   LOC101928841 [ SEEK ]   LOC101928841 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101928841 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928841
GTEX Portal (Tissue expression)LOC101928841
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101928841
DMDM Disease mutations101928841
Blocks (Seattle)LOC101928841
Protein Interaction databases
BioGRIDLOC101928841
STRING (EMBL)LOC101928841
ZODIACLOC101928841
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101928841
BioCentury BCIQLOC101928841
ClinGenLOC101928841
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928841
Clinical trialLOC101928841
Miscellaneous
canSAR (ICR)LOC101928841 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101928841
EVEXLOC101928841
GoPubMedLOC101928841
iHOPLOC101928841
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:51:35 CET 2017

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