Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101929516 (uncharacterized LOC101929516)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101929516
Atlas_Id 67572
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 39565070 and ends at 39573203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101929516  101929516  uncharacterized LOC101929516
Aliases
GeneCards (Weizmann)LOC101929516
Ensembl hg19 (Hinxton)ENSG00000228060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228060 [Gene_View]  chr1:39565070-39573203 [Contig_View]  LOC101929516 [Vega]
ICGC DataPortalENSG00000228060
TCGA cBioPortalLOC101929516
AceView (NCBI)LOC101929516
Genatlas (Paris)LOC101929516
WikiGenes101929516
SOURCE (Princeton)LOC101929516
Genetics Home Reference (NIH)LOC101929516
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101929516  -     chr1:39565070-39573203 +  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101929516  -     1p34.3   [Description]    (hg19-Feb_2009)
EnsemblLOC101929516 - 1p34.3 [CytoView hg19]  LOC101929516 - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBILOC101929516 [Mapview hg19]  LOC101929516 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI215476 DB086403 HY203033
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101929516
Cluster EST : UnigeneHs.662694 [ NCBI ]
CGAP (NCI)Hs.662694
Alternative Splicing GalleryENSG00000228060
Gene ExpressionLOC101929516 [ NCBI-GEO ]   LOC101929516 [ EBI - ARRAY_EXPRESS ]   LOC101929516 [ SEEK ]   LOC101929516 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101929516 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929516
GTEX Portal (Tissue expression)LOC101929516
Human Protein AtlasENSG00000228060-LOC101929516 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101929516
DMDM Disease mutations101929516
Blocks (Seattle)LOC101929516
Human Protein Atlas [tissue]ENSG00000228060-LOC101929516 [tissue]
Protein Interaction databases
FunCoupENSG00000228060
BioGRIDLOC101929516
STRING (EMBL)LOC101929516
ZODIACLOC101929516
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101929516
BioCentury BCIQLOC101929516
ClinGenLOC101929516
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929516
Clinical trialLOC101929516
Miscellaneous
canSAR (ICR)LOC101929516 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101929516
EVEXLOC101929516
GoPubMedLOC101929516
iHOPLOC101929516
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:05:22 CET 2017

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