Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC101929626 (uncharacterized LOC101929626)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101929626
Atlas_Id 67601
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 46133371 and ends at 46139080 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC101929626  101929626  uncharacterized LOC101929626
Aliases
GeneCards (Weizmann)LOC101929626
Ensembl hg19 (Hinxton)ENSG00000227857 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227857 [Gene_View]  chr1:46133371-46139080 [Contig_View]  LOC101929626 [Vega]
ICGC DataPortalENSG00000227857
TCGA cBioPortalLOC101929626
AceView (NCBI)LOC101929626
Genatlas (Paris)LOC101929626
WikiGenes101929626
SOURCE (Princeton)LOC101929626
Genetics Home Reference (NIH)LOC101929626
Genomic and cartography
GoldenPath hg38 (UCSC)LOC101929626  -     chr1:46133371-46139080 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC101929626  -     1p34.1   [Description]    (hg19-Feb_2009)
EnsemblLOC101929626 - 1p34.1 [CytoView hg19]  LOC101929626 - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBILOC101929626 [Mapview hg19]  LOC101929626 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA993332
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC101929626
Cluster EST : UnigeneHs.534951 [ NCBI ]
CGAP (NCI)Hs.534951
Alternative Splicing GalleryENSG00000227857
Gene ExpressionLOC101929626 [ NCBI-GEO ]   LOC101929626 [ EBI - ARRAY_EXPRESS ]   LOC101929626 [ SEEK ]   LOC101929626 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC101929626 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929626
GTEX Portal (Tissue expression)LOC101929626
Human Protein AtlasENSG00000227857-LOC101929626 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC101929626
DMDM Disease mutations101929626
Blocks (Seattle)LOC101929626
Human Protein Atlas [tissue]ENSG00000227857-LOC101929626 [tissue]
Protein Interaction databases
FunCoupENSG00000227857
BioGRIDLOC101929626
STRING (EMBL)LOC101929626
ZODIACLOC101929626
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101929626
BioCentury BCIQLOC101929626
ClinGenLOC101929626
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929626
Clinical trialLOC101929626
Miscellaneous
canSAR (ICR)LOC101929626 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC101929626
EVEXLOC101929626
GoPubMedLOC101929626
iHOPLOC101929626
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:48:45 CET 2017

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