Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC102546299 (uncharacterized LOC102546299)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 102546299
Atlas_Id 67667
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 164470279 and ends at 164542983 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC102546299  102546299  uncharacterized LOC102546299
Aliases
GeneCards (Weizmann)LOC102546299
Ensembl hg19 (Hinxton)ENSG00000241956 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241956 [Gene_View]  chr5:164470279-164542983 [Contig_View]  LOC102546299 [Vega]
ICGC DataPortalENSG00000241956
TCGA cBioPortalLOC102546299
AceView (NCBI)LOC102546299
Genatlas (Paris)LOC102546299
WikiGenes102546299
SOURCE (Princeton)LOC102546299
Genetics Home Reference (NIH)LOC102546299
Genomic and cartography
GoldenPath hg38 (UCSC)LOC102546299  -     chr5:164470279-164542983 +  5q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC102546299  -     5q34   [Description]    (hg19-Feb_2009)
EnsemblLOC102546299 - 5q34 [CytoView hg19]  LOC102546299 - 5q34 [CytoView hg38]
Mapping of homologs : NCBILOC102546299 [Mapview hg19]  LOC102546299 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC011998 BC054858 BI771517 BX112058 DA550071
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC102546299
Cluster EST : UnigeneHs.437730 [ NCBI ]
CGAP (NCI)Hs.437730
Alternative Splicing GalleryENSG00000241956
Gene ExpressionLOC102546299 [ NCBI-GEO ]   LOC102546299 [ EBI - ARRAY_EXPRESS ]   LOC102546299 [ SEEK ]   LOC102546299 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC102546299 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102546299
GTEX Portal (Tissue expression)LOC102546299
Human Protein AtlasENSG00000241956-LOC102546299 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC102546299
DMDM Disease mutations102546299
Blocks (Seattle)LOC102546299
Human Protein Atlas [tissue]ENSG00000241956-LOC102546299 [tissue]
Protein Interaction databases
FunCoupENSG00000241956
BioGRIDLOC102546299
STRING (EMBL)LOC102546299
ZODIACLOC102546299
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease102546299
BioCentury BCIQLOC102546299
ClinGenLOC102546299
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102546299
Clinical trialLOC102546299
Miscellaneous
canSAR (ICR)LOC102546299 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC102546299
EVEXLOC102546299
GoPubMedLOC102546299
iHOPLOC102546299
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:52:41 CET 2017

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