Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC102724009 (uncharacterized LOC102724009)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 102724009
Atlas_Id 67714
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 5019215 and ends at 5020093 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC102724009  102724009  uncharacterized LOC102724009
Aliases
GeneCards (Weizmann)LOC102724009
Ensembl hg19 (Hinxton)ENSG00000227495 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227495 [Gene_View]  chr17:5019215-5020093 [Contig_View]  LOC102724009 [Vega]
ICGC DataPortalENSG00000227495
TCGA cBioPortalLOC102724009
AceView (NCBI)LOC102724009
Genatlas (Paris)LOC102724009
WikiGenes102724009
SOURCE (Princeton)LOC102724009
Genetics Home Reference (NIH)LOC102724009
Genomic and cartography
GoldenPath hg38 (UCSC)LOC102724009  -     chr17:5019215-5020093 -  17p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC102724009  -     17p13.2   [Description]    (hg19-Feb_2009)
EnsemblLOC102724009 - 17p13.2 [CytoView hg19]  LOC102724009 - 17p13.2 [CytoView hg38]
Mapping of homologs : NCBILOC102724009 [Mapview hg19]  LOC102724009 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE674687
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC102724009
Cluster EST : UnigeneHs.666487 [ NCBI ]
CGAP (NCI)Hs.666487
Alternative Splicing GalleryENSG00000227495
Gene ExpressionLOC102724009 [ NCBI-GEO ]   LOC102724009 [ EBI - ARRAY_EXPRESS ]   LOC102724009 [ SEEK ]   LOC102724009 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC102724009 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724009
GTEX Portal (Tissue expression)LOC102724009
Human Protein AtlasENSG00000227495-LOC102724009 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC102724009
DMDM Disease mutations102724009
Blocks (Seattle)LOC102724009
Human Protein Atlas [tissue]ENSG00000227495-LOC102724009 [tissue]
Protein Interaction databases
FunCoupENSG00000227495
BioGRIDLOC102724009
STRING (EMBL)LOC102724009
ZODIACLOC102724009
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease102724009
BioCentury BCIQLOC102724009
ClinGenLOC102724009
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724009
Clinical trialLOC102724009
Miscellaneous
canSAR (ICR)LOC102724009 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC102724009
EVEXLOC102724009
GoPubMedLOC102724009
iHOPLOC102724009
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:52:57 CET 2017

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