Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105369209 (putative uncharacterized protein FLJ44790)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105369209
Atlas_Id 78763
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62231960 and ends at 62236299 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105369209  105369209  putative uncharacterized protein FLJ44790
Aliases
GeneCards (Weizmann)LOC105369209
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:62231960-62236299 [Contig_View]  LOC105369209 [Vega]
TCGA cBioPortalLOC105369209
AceView (NCBI)LOC105369209
Genatlas (Paris)LOC105369209
WikiGenes105369209
SOURCE (Princeton)LOC105369209
Genetics Home Reference (NIH)LOC105369209
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105369209  -     chr20:62231960-62236299 +  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105369209  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblLOC105369209 - 20q13.33 [CytoView hg19]  LOC105369209 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBILOC105369209 [Mapview hg19]  LOC105369209 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126744 BC132993
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105369209
Cluster EST : UnigeneHs.711994 [ NCBI ]
CGAP (NCI)Hs.711994
Gene ExpressionLOC105369209 [ NCBI-GEO ]   LOC105369209 [ EBI - ARRAY_EXPRESS ]   LOC105369209 [ SEEK ]   LOC105369209 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105369209 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105369209
GTEX Portal (Tissue expression)LOC105369209
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZTC4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZTC4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZTC4
Splice isoforms : SwissVarQ6ZTC4
PhosPhoSitePlusQ6ZTC4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105369209
DMDM Disease mutations105369209
Blocks (Seattle)LOC105369209
SuperfamilyQ6ZTC4
Peptide AtlasQ6ZTC4
Protein Interaction databases
DIP (DOE-UCLA)Q6ZTC4
IntAct (EBI)Q6ZTC4
BioGRIDLOC105369209
STRING (EMBL)LOC105369209
ZODIACLOC105369209
Ontologies - Pathways
QuickGOQ6ZTC4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC105369209
Atlas of Cancer Signalling NetworkLOC105369209
Wikipedia pathwaysLOC105369209
Orthology - Evolution
OrthoDB105369209
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZTC4
HOGENOMQ6ZTC4
Homologs : HomoloGeneLOC105369209
Homology/Alignments : Family Browser (UCSC)LOC105369209
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC105369209 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC105369209
dbVarLOC105369209
ClinVarLOC105369209
1000_GenomesLOC105369209 
Exome Variant ServerLOC105369209
ExAC (Exome Aggregation Consortium)LOC105369209 (select the gene name)
Genetic variants : HAPMAP105369209
Genomic Variants (DGV)LOC105369209 [DGVbeta]
DECIPHERLOC105369209 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLOC105369209 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC105369209
DgiDB (Drug Gene Interaction Database)LOC105369209
DoCM (Curated mutations)LOC105369209 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC105369209 (select a term)
intoGenLOC105369209
Cancer3DLOC105369209(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC105369209
Genetic Testing Registry LOC105369209
NextProtQ6ZTC4 [Medical]
TSGene105369209
GENETestsLOC105369209
Target ValidationLOC105369209
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105369209
BioCentury BCIQLOC105369209
ClinGenLOC105369209
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369209
Clinical trialLOC105369209
Miscellaneous
canSAR (ICR)LOC105369209 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105369209
EVEXLOC105369209
GoPubMedLOC105369209
iHOPLOC105369209
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:18:54 CEST 2017

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