Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105369230 (HLA class II histocompatibility antigen, DRB1-7 beta chain)

Identity

Other aliasHLA-DRB1
HGNC (Hugo) -
LocusID (NCBI) 105369230
Atlas_Id 78961
Location 6_GL000256v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 3936436 and ends at 3937532 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105369230  105369230  HLA class II histocompatibility antigen, DRB1-7 beta chain
AliasesHLA-DRB1
GeneCards (Weizmann)LOC105369230
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6_GL000256v2_alt:3936436-3937532 [Contig_View]  LOC105369230 [Vega]
TCGA cBioPortalLOC105369230
AceView (NCBI)LOC105369230
Genatlas (Paris)LOC105369230
WikiGenes105369230
SOURCE (Princeton)LOC105369230
Genetics Home Reference (NIH)LOC105369230
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105369230  -     chr6_GL000256v2_alt:3936436-3937532 -  6_GL000256v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105369230  -     6_GL000256v2_alt   [Description]    (hg19-Feb_2009)
EnsemblLOC105369230 - 6_GL000256v2_alt [CytoView hg19]  LOC105369230 - 6_GL000256v2_alt [CytoView hg38]
Mapping of homologs : NCBILOC105369230 [Mapview hg19]  LOC105369230 [Mapview hg38]
Gene and transcription
Genbank (Entrez)HG974601 HM067848
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105369230
Cluster EST : UnigeneHs.696211 [ NCBI ]
CGAP (NCI)Hs.696211
Gene ExpressionLOC105369230 [ NCBI-GEO ]   LOC105369230 [ EBI - ARRAY_EXPRESS ]   LOC105369230 [ SEEK ]   LOC105369230 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105369230 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369230
GTEX Portal (Tissue expression)LOC105369230
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105369230
DMDM Disease mutations105369230
Blocks (Seattle)LOC105369230
Protein Interaction databases
BioGRIDLOC105369230
STRING (EMBL)LOC105369230
ZODIACLOC105369230
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105369230
BioCentury BCIQLOC105369230
ClinGenLOC105369230
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369230
Clinical trialLOC105369230
Miscellaneous
canSAR (ICR)LOC105369230 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105369230
EVEXLOC105369230
GoPubMedLOC105369230
iHOPLOC105369230
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:22:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.