Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105369971 (uncharacterized LOC105369971)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105369971
Atlas_Id 78467
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 51848223 and ends at 51852729 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105369971  105369971  uncharacterized LOC105369971
Aliases
GeneCards (Weizmann)LOC105369971
Ensembl hg19 (Hinxton)ENSG00000259887 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259887 [Gene_View]  chr12:51848223-51852729 [Contig_View]  LOC105369971 [Vega]
ICGC DataPortalENSG00000259887
TCGA cBioPortalLOC105369971
AceView (NCBI)LOC105369971
Genatlas (Paris)LOC105369971
WikiGenes105369971
SOURCE (Princeton)LOC105369971
Genetics Home Reference (NIH)LOC105369971
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105369971  -     chr12:51848223-51852729 +  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105369971  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblLOC105369971 - 12q13.13 [CytoView hg19]  LOC105369971 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBILOC105369971 [Mapview hg19]  LOC105369971 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CN371412
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105369971
Cluster EST : UnigeneHs.505582 [ NCBI ]
CGAP (NCI)Hs.505582
Alternative Splicing GalleryENSG00000259887
Gene ExpressionLOC105369971 [ NCBI-GEO ]   LOC105369971 [ EBI - ARRAY_EXPRESS ]   LOC105369971 [ SEEK ]   LOC105369971 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105369971 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369971
GTEX Portal (Tissue expression)LOC105369971
Human Protein AtlasENSG00000259887-LOC105369971 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105369971
DMDM Disease mutations105369971
Blocks (Seattle)LOC105369971
Human Protein Atlas [tissue]ENSG00000259887-LOC105369971 [tissue]
Protein Interaction databases
FunCoupENSG00000259887
BioGRIDLOC105369971
STRING (EMBL)LOC105369971
ZODIACLOC105369971
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105369971
BioCentury BCIQLOC105369971
ClinGenLOC105369971
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369971
Clinical trialLOC105369971
Miscellaneous
canSAR (ICR)LOC105369971 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105369971
EVEXLOC105369971
GoPubMedLOC105369971
iHOPLOC105369971
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:06:45 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.