Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105371184 (uncharacterized LOC105371184)

Identity

Other aliasLA16c-313D11.9
HGNC (Hugo) -
LocusID (NCBI) 105371184
Atlas_Id 78343
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 678518 and ends at 679777 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105371184  105371184  uncharacterized LOC105371184
AliasesLA16c-313D11.9
GeneCards (Weizmann)LOC105371184
Ensembl hg19 (Hinxton)ENSG00000260394 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260394 [Gene_View]  chr16:678518-679777 [Contig_View]  LOC105371184 [Vega]
ICGC DataPortalENSG00000260394
TCGA cBioPortalLOC105371184
AceView (NCBI)LOC105371184
Genatlas (Paris)LOC105371184
WikiGenes105371184
SOURCE (Princeton)LOC105371184
Genetics Home Reference (NIH)LOC105371184
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105371184  -     chr16:678518-679777 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105371184  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblLOC105371184 - 16p13.3 [CytoView hg19]  LOC105371184 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILOC105371184 [Mapview hg19]  LOC105371184 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC004968 BC150148 BX088969
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105371184
Cluster EST : UnigeneHs.738328 [ NCBI ]
CGAP (NCI)Hs.738328
Alternative Splicing GalleryENSG00000260394
Gene ExpressionLOC105371184 [ NCBI-GEO ]   LOC105371184 [ EBI - ARRAY_EXPRESS ]   LOC105371184 [ SEEK ]   LOC105371184 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105371184 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371184
GTEX Portal (Tissue expression)LOC105371184
Human Protein AtlasENSG00000260394-LOC105371184 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105371184
DMDM Disease mutations105371184
Blocks (Seattle)LOC105371184
Human Protein Atlas [tissue]ENSG00000260394-LOC105371184 [tissue]
Protein Interaction databases
FunCoupENSG00000260394
BioGRIDLOC105371184
STRING (EMBL)LOC105371184
ZODIACLOC105371184
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105371184
BioCentury BCIQLOC105371184
ClinGenLOC105371184
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371184
Clinical trialLOC105371184
Miscellaneous
canSAR (ICR)LOC105371184 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105371184
EVEXLOC105371184
GoPubMedLOC105371184
iHOPLOC105371184
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:06:59 CET 2017

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