Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105371267 (p53-regulated lncRNA 1)

Identity

Other aliasPR-lncRNA-1
HGNC (Hugo) -
LocusID (NCBI) 105371267
Atlas_Id 78349
Location 16q12.2  [Link to chromosome band 16q12]
Location_base_pair Starts at 53035690 and ends at 53052873 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105371267  105371267  p53-regulated lncRNA 1
AliasesPR-lncRNA-1
GeneCards (Weizmann)LOC105371267
Ensembl hg19 (Hinxton)ENSG00000277639 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277639 [Gene_View]  chr16:53035690-53052873 [Contig_View]  LOC105371267 [Vega]
ICGC DataPortalENSG00000277639
TCGA cBioPortalLOC105371267
AceView (NCBI)LOC105371267
Genatlas (Paris)LOC105371267
WikiGenes105371267
SOURCE (Princeton)LOC105371267
Genetics Home Reference (NIH)LOC105371267
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105371267  -     chr16:53035690-53052873 -  16q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105371267  -     16q12.2   [Description]    (hg19-Feb_2009)
EnsemblLOC105371267 - 16q12.2 [CytoView hg19]  LOC105371267 - 16q12.2 [CytoView hg38]
Mapping of homologs : NCBILOC105371267 [Mapview hg19]  LOC105371267 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CA313413 CR736442
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105371267
Cluster EST : UnigeneHs.147562 [ NCBI ]
CGAP (NCI)Hs.147562
Alternative Splicing GalleryENSG00000277639
Gene ExpressionLOC105371267 [ NCBI-GEO ]   LOC105371267 [ EBI - ARRAY_EXPRESS ]   LOC105371267 [ SEEK ]   LOC105371267 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105371267 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371267
GTEX Portal (Tissue expression)LOC105371267
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105371267
DMDM Disease mutations105371267
Blocks (Seattle)LOC105371267
Human Protein AtlasENSG00000277639
Protein Interaction databases
FunCoupENSG00000277639
BioGRIDLOC105371267
STRING (EMBL)LOC105371267
ZODIACLOC105371267
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105371267
BioCentury BCIQLOC105371267
ClinGenLOC105371267
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371267
Clinical trialLOC105371267
Miscellaneous
canSAR (ICR)LOC105371267 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105371267
EVEXLOC105371267
GoPubMedLOC105371267
iHOPLOC105371267
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:23:04 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.