Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105371849 (uncharacterized LOC105371849)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105371849
Atlas_Id 78367
Location 17q23.1  [Link to chromosome band 17q23]
Location_base_pair Starts at 60079309 and ends at 60088692 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105371849  105371849  uncharacterized LOC105371849
Aliases
GeneCards (Weizmann)LOC105371849
Ensembl hg19 (Hinxton)ENSG00000267416 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267416 [Gene_View]  chr17:60079309-60088692 [Contig_View]  LOC105371849 [Vega]
ICGC DataPortalENSG00000267416
TCGA cBioPortalLOC105371849
AceView (NCBI)LOC105371849
Genatlas (Paris)LOC105371849
WikiGenes105371849
SOURCE (Princeton)LOC105371849
Genetics Home Reference (NIH)LOC105371849
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105371849  -     chr17:60079309-60088692 +  17q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105371849  -     17q23.1   [Description]    (hg19-Feb_2009)
EnsemblLOC105371849 - 17q23.1 [CytoView hg19]  LOC105371849 - 17q23.1 [CytoView hg38]
Mapping of homologs : NCBILOC105371849 [Mapview hg19]  LOC105371849 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU630466
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105371849
Cluster EST : UnigeneHs.621935 [ NCBI ]
CGAP (NCI)Hs.621935
Alternative Splicing GalleryENSG00000267416
Gene ExpressionLOC105371849 [ NCBI-GEO ]   LOC105371849 [ EBI - ARRAY_EXPRESS ]   LOC105371849 [ SEEK ]   LOC105371849 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105371849 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371849
GTEX Portal (Tissue expression)LOC105371849
Human Protein AtlasENSG00000267416-LOC105371849 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105371849
DMDM Disease mutations105371849
Blocks (Seattle)LOC105371849
Human Protein Atlas [tissue]ENSG00000267416-LOC105371849 [tissue]
Protein Interaction databases
FunCoupENSG00000267416
BioGRIDLOC105371849
STRING (EMBL)LOC105371849
ZODIACLOC105371849
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105371849
BioCentury BCIQLOC105371849
ClinGenLOC105371849
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371849
Clinical trialLOC105371849
Miscellaneous
canSAR (ICR)LOC105371849 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105371849
EVEXLOC105371849
GoPubMedLOC105371849
iHOPLOC105371849
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:07:07 CET 2017

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