Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105372440 (uncharacterized LOC105372440)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105372440
Atlas_Id 77671
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 50776146 and ends at 50786210 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105372440  105372440  uncharacterized LOC105372440
Aliases
GeneCards (Weizmann)LOC105372440
Ensembl hg19 (Hinxton)ENSG00000261341 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261341 [Gene_View]  chr19:50776146-50786210 [Contig_View]  LOC105372440 [Vega]
ICGC DataPortalENSG00000261341
TCGA cBioPortalLOC105372440
AceView (NCBI)LOC105372440
Genatlas (Paris)LOC105372440
WikiGenes105372440
SOURCE (Princeton)LOC105372440
Genetics Home Reference (NIH)LOC105372440
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105372440  -     chr19:50776146-50786210 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105372440  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblLOC105372440 - 19q13.33 [CytoView hg19]  LOC105372440 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBILOC105372440 [Mapview hg19]  LOC105372440 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX104195 GQ868703
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105372440
Cluster EST : UnigeneHs.606943 [ NCBI ]
CGAP (NCI)Hs.606943
Alternative Splicing GalleryENSG00000261341
Gene ExpressionLOC105372440 [ NCBI-GEO ]   LOC105372440 [ EBI - ARRAY_EXPRESS ]   LOC105372440 [ SEEK ]   LOC105372440 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105372440 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372440
GTEX Portal (Tissue expression)LOC105372440
Human Protein AtlasENSG00000261341-LOC105372440 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105372440
DMDM Disease mutations105372440
Blocks (Seattle)LOC105372440
Human Protein Atlas [tissue]ENSG00000261341-LOC105372440 [tissue]
Protein Interaction databases
FunCoupENSG00000261341
BioGRIDLOC105372440
STRING (EMBL)LOC105372440
ZODIACLOC105372440
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105372440
BioCentury BCIQLOC105372440
ClinGenLOC105372440
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372440
Clinical trialLOC105372440
Miscellaneous
canSAR (ICR)LOC105372440 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105372440
EVEXLOC105372440
GoPubMedLOC105372440
iHOPLOC105372440
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:07:14 CET 2017

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