Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105372476 (uncharacterized LOC105372476)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105372476
Atlas_Id 78569
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57267193 and ends at 57280334 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105372476  105372476  uncharacterized LOC105372476
Aliases
GeneCards (Weizmann)LOC105372476
Ensembl hg19 (Hinxton)ENSG00000267871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267871 [Gene_View]  chr19:57267193-57280334 [Contig_View]  LOC105372476 [Vega]
ICGC DataPortalENSG00000267871
TCGA cBioPortalLOC105372476
AceView (NCBI)LOC105372476
Genatlas (Paris)LOC105372476
WikiGenes105372476
SOURCE (Princeton)LOC105372476
Genetics Home Reference (NIH)LOC105372476
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105372476  -     chr19:57267193-57280334 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105372476  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblLOC105372476 - 19q13.43 [CytoView hg19]  LOC105372476 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBILOC105372476 [Mapview hg19]  LOC105372476 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ026115 BX098599 HY061938
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105372476
Cluster EST : UnigeneHs.341780 [ NCBI ]
CGAP (NCI)Hs.341780
Alternative Splicing GalleryENSG00000267871
Gene ExpressionLOC105372476 [ NCBI-GEO ]   LOC105372476 [ EBI - ARRAY_EXPRESS ]   LOC105372476 [ SEEK ]   LOC105372476 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105372476 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372476
GTEX Portal (Tissue expression)LOC105372476
Human Protein AtlasENSG00000267871-LOC105372476 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105372476
DMDM Disease mutations105372476
Blocks (Seattle)LOC105372476
Human Protein Atlas [tissue]ENSG00000267871-LOC105372476 [tissue]
Protein Interaction databases
FunCoupENSG00000267871
BioGRIDLOC105372476
STRING (EMBL)LOC105372476
ZODIACLOC105372476
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105372476
BioCentury BCIQLOC105372476
ClinGenLOC105372476
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372476
Clinical trialLOC105372476
Miscellaneous
canSAR (ICR)LOC105372476 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105372476
EVEXLOC105372476
GoPubMedLOC105372476
iHOPLOC105372476
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:54:07 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.