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LOC105372672 (uncharacterized LOC105372672)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105372672
Atlas_Id 78124
Location 20q13.2  [Link to chromosome band 20q13]
Location_base_pair Starts at 53608354 and ends at 53634590 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

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Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105372672  105372672  uncharacterized LOC105372672Aliases
GeneCards (Weizmann)LOC105372672
Ensembl hg19 (Hinxton)ENSG00000235415 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235415 [Gene_View]  chr20:53608354-53634590 [Contig_View]  LOC105372672 [Vega]
ICGC DataPortalENSG00000235415
TCGA cBioPortalLOC105372672
AceView (NCBI)LOC105372672
Genatlas (Paris)LOC105372672
WikiGenes105372672
SOURCE (Princeton)LOC105372672
Genetics Home Reference (NIH)LOC105372672
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105372672  -     chr20:53608354-53634590 +  20q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105372672  -     20q13.2   [Description]    (hg19-Feb_2009)
EnsemblLOC105372672 - 20q13.2 [CytoView hg19]  LOC105372672 - 20q13.2 [CytoView hg38]
Mapping of homologs : NCBILOC105372672 [Mapview hg19]  LOC105372672 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW661821 AW663569
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105372672
Cluster EST : UnigeneHs.259350 [ NCBI ]
CGAP (NCI)Hs.259350
Alternative Splicing GalleryENSG00000235415
Gene ExpressionLOC105372672 [ NCBI-GEO ]   LOC105372672 [ EBI - ARRAY_EXPRESS ]   LOC105372672 [ SEEK ]   LOC105372672 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105372672 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372672
GTEX Portal (Tissue expression)LOC105372672
Human Protein AtlasENSG00000235415-LOC105372672 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105372672
DMDM Disease mutations105372672
Blocks (Seattle)LOC105372672
Human Protein Atlas [tissue]ENSG00000235415-LOC105372672 [tissue]
Protein Interaction databases
FunCoupENSG00000235415
BioGRIDLOC105372672
STRING (EMBL)LOC105372672
ZODIACLOC105372672
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105372672
BioCentury BCIQLOC105372672
ClinGenLOC105372672
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372672
Clinical trialLOC105372672
Miscellaneous
canSAR (ICR)LOC105372672 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105372672
EVEXLOC105372672
GoPubMedLOC105372672
iHOPLOC105372672
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:54:11 CET 2017

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