Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105373878 (uncharacterized LOC105373878)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105373878
Atlas_Id 78462
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 217978707 and ends at 217992615 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105373878  105373878  uncharacterized LOC105373878
Aliases
GeneCards (Weizmann)LOC105373878
Ensembl hg19 (Hinxton)ENSG00000223923 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223923 [Gene_View]  chr2:217978707-217992615 [Contig_View]  LOC105373878 [Vega]
ICGC DataPortalENSG00000223923
TCGA cBioPortalLOC105373878
AceView (NCBI)LOC105373878
Genatlas (Paris)LOC105373878
WikiGenes105373878
SOURCE (Princeton)LOC105373878
Genetics Home Reference (NIH)LOC105373878
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105373878  -     chr2:217978707-217992615 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105373878  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblLOC105373878 - 2q35 [CytoView hg19]  LOC105373878 - 2q35 [CytoView hg38]
Mapping of homologs : NCBILOC105373878 [Mapview hg19]  LOC105373878 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB245334
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105373878
Cluster EST : UnigeneHs.630709 [ NCBI ]
CGAP (NCI)Hs.630709
Alternative Splicing GalleryENSG00000223923
Gene ExpressionLOC105373878 [ NCBI-GEO ]   LOC105373878 [ EBI - ARRAY_EXPRESS ]   LOC105373878 [ SEEK ]   LOC105373878 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105373878 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373878
GTEX Portal (Tissue expression)LOC105373878
Human Protein AtlasENSG00000223923-LOC105373878 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105373878
DMDM Disease mutations105373878
Blocks (Seattle)LOC105373878
Human Protein Atlas [tissue]ENSG00000223923-LOC105373878 [tissue]
Protein Interaction databases
FunCoupENSG00000223923
BioGRIDLOC105373878
STRING (EMBL)LOC105373878
ZODIACLOC105373878
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105373878
BioCentury BCIQLOC105373878
ClinGenLOC105373878
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373878
Clinical trialLOC105373878
Miscellaneous
canSAR (ICR)LOC105373878 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105373878
EVEXLOC105373878
GoPubMedLOC105373878
iHOPLOC105373878
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:54:24 CET 2017

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