Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105374546 (uncharacterized LOC105374546)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105374546
Atlas_Id 78178
Location 4p15.2  [Link to chromosome band 4p15]
Location_base_pair Starts at 26859624 and ends at 26860599 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105374546  105374546  uncharacterized LOC105374546
Aliases
GeneCards (Weizmann)LOC105374546
Ensembl hg19 (Hinxton)ENSG00000240005 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240005 [Gene_View]  chr4:26859624-26860599 [Contig_View]  LOC105374546 [Vega]
ICGC DataPortalENSG00000240005
TCGA cBioPortalLOC105374546
AceView (NCBI)LOC105374546
Genatlas (Paris)LOC105374546
WikiGenes105374546
SOURCE (Princeton)LOC105374546
Genetics Home Reference (NIH)LOC105374546
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105374546  -     chr4:26859624-26860599 -  4p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105374546  -     4p15.2   [Description]    (hg19-Feb_2009)
EnsemblLOC105374546 - 4p15.2 [CytoView hg19]  LOC105374546 - 4p15.2 [CytoView hg38]
Mapping of homologs : NCBILOC105374546 [Mapview hg19]  LOC105374546 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU942553 BU951472 BX100535 DB507158
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105374546
Cluster EST : UnigeneHs.548859 [ NCBI ]
CGAP (NCI)Hs.548859
Alternative Splicing GalleryENSG00000240005
Gene ExpressionLOC105374546 [ NCBI-GEO ]   LOC105374546 [ EBI - ARRAY_EXPRESS ]   LOC105374546 [ SEEK ]   LOC105374546 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105374546 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374546
GTEX Portal (Tissue expression)LOC105374546
Human Protein AtlasENSG00000240005-LOC105374546 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105374546
DMDM Disease mutations105374546
Blocks (Seattle)LOC105374546
Human Protein Atlas [tissue]ENSG00000240005-LOC105374546 [tissue]
Protein Interaction databases
FunCoupENSG00000240005
BioGRIDLOC105374546
STRING (EMBL)LOC105374546
ZODIACLOC105374546
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105374546
BioCentury BCIQLOC105374546
ClinGenLOC105374546
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374546
Clinical trialLOC105374546
Miscellaneous
canSAR (ICR)LOC105374546 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105374546
EVEXLOC105374546
GoPubMedLOC105374546
iHOPLOC105374546
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:07:38 CET 2017

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