Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105375014 (uncharacterized LOC105375014)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105375014
Atlas_Id 78154
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30839529 and ends at 30848159 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105375014  105375014  uncharacterized LOC105375014
Aliases
GeneCards (Weizmann)LOC105375014
Ensembl hg19 (Hinxton)ENSG00000237923 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237923 [Gene_View]  ENSG00000237923 [Sequence]  chr6:30839529-30848159 [Contig_View]  LOC105375014 [Vega]
ICGC DataPortalENSG00000237923
TCGA cBioPortalLOC105375014
AceView (NCBI)LOC105375014
Genatlas (Paris)LOC105375014
WikiGenes105375014
SOURCE (Princeton)LOC105375014
Genetics Home Reference (NIH)LOC105375014
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105375014  -     chr6:30839529-30848159 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105375014  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblLOC105375014 - 6p21.33 [CytoView hg19]  LOC105375014 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBILOC105375014 [Mapview hg19]  LOC105375014 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI867733 CR745536
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248
Consensus coding sequences : CCDS (NCBI)LOC105375014
Cluster EST : UnigeneHs.551770 [ NCBI ]
CGAP (NCI)Hs.551770
Alternative Splicing GalleryENSG00000237923
Gene ExpressionLOC105375014 [ NCBI-GEO ]   LOC105375014 [ EBI - ARRAY_EXPRESS ]   LOC105375014 [ SEEK ]   LOC105375014 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105375014 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375014
GTEX Portal (Tissue expression)LOC105375014
Human Protein AtlasENSG00000237923-LOC105375014 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105375014
DMDM Disease mutations105375014
Blocks (Seattle)LOC105375014
Human Protein Atlas [tissue]ENSG00000237923-LOC105375014 [tissue]
Protein Interaction databases
FunCoupENSG00000237923
BioGRIDLOC105375014
STRING (EMBL)LOC105375014
ZODIACLOC105375014
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105375014
BioCentury BCIQLOC105375014
ClinGenLOC105375014
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375014
Clinical trialLOC105375014
Miscellaneous
canSAR (ICR)LOC105375014 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105375014
EVEXLOC105375014
GoPubMedLOC105375014
iHOPLOC105375014
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:07:13 CEST 2018

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