Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105375115 (uncharacterized LOC105375115)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105375115
Atlas_Id 78036
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 174920 and ends at 176013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105375115  105375115  uncharacterized LOC105375115
Aliases
GeneCards (Weizmann)LOC105375115
Ensembl hg19 (Hinxton)ENSG00000239715 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239715 [Gene_View]  chr7:174920-176013 [Contig_View]  LOC105375115 [Vega]
ICGC DataPortalENSG00000239715
TCGA cBioPortalLOC105375115
AceView (NCBI)LOC105375115
Genatlas (Paris)LOC105375115
WikiGenes105375115
SOURCE (Princeton)LOC105375115
Genetics Home Reference (NIH)LOC105375115
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105375115  -     chr7:174920-176013 +  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105375115  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC105375115 - 7p22.3 [CytoView hg19]  LOC105375115 - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBILOC105375115 [Mapview hg19]  LOC105375115 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA405358
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_187558 NT_187653
Consensus coding sequences : CCDS (NCBI)LOC105375115
Cluster EST : UnigeneHs.299538 [ NCBI ]
CGAP (NCI)Hs.299538
Alternative Splicing GalleryENSG00000239715
Gene ExpressionLOC105375115 [ NCBI-GEO ]   LOC105375115 [ EBI - ARRAY_EXPRESS ]   LOC105375115 [ SEEK ]   LOC105375115 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105375115 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375115
GTEX Portal (Tissue expression)LOC105375115
Human Protein AtlasENSG00000239715-LOC105375115 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105375115
DMDM Disease mutations105375115
Blocks (Seattle)LOC105375115
Human Protein Atlas [tissue]ENSG00000239715-LOC105375115 [tissue]
Protein Interaction databases
FunCoupENSG00000239715
BioGRIDLOC105375115
STRING (EMBL)LOC105375115
ZODIACLOC105375115
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105375115
BioCentury BCIQLOC105375115
ClinGenLOC105375115
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375115
Clinical trialLOC105375115
Miscellaneous
canSAR (ICR)LOC105375115 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105375115
EVEXLOC105375115
GoPubMedLOC105375115
iHOPLOC105375115
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:07:45 CET 2017

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