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LOC105375800 (chromosome 12 open reading frame 49 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105375800
Atlas_Id 78565
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144840663 and ends at 144842678 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105375800  105375800  chromosome 12 open reading frame 49 pseudogene
Aliases
GeneCards (Weizmann)LOC105375800
Ensembl hg19 (Hinxton)ENSG00000254973 [Gene_View]  chr8:144840663-144842678 [Contig_View]  LOC105375800 [Vega]
Ensembl hg38 (Hinxton)ENSG00000254973 [Gene_View]  chr8:144840663-144842678 [Contig_View]  LOC105375800 [Vega]
ICGC DataPortalENSG00000254973
TCGA cBioPortalLOC105375800
AceView (NCBI)LOC105375800
Genatlas (Paris)LOC105375800
WikiGenes105375800
SOURCE (Princeton)LOC105375800
Genetics Home Reference (NIH)LOC105375800
Genomic and cartography
GoldenPath hg19 (UCSC)LOC105375800  -     chr8:144840663-144842678 -  8q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC105375800  -     8q24.3   [Description]    (hg38-Dec_2013)
EnsemblLOC105375800 - 8q24.3 [CytoView hg19]  LOC105375800 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBILOC105375800 [Mapview hg19]  LOC105375800 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187571
Consensus coding sequences : CCDS (NCBI)LOC105375800
Cluster EST : UnigeneHs.632037 [ NCBI ]
CGAP (NCI)Hs.632037
Alternative Splicing GalleryENSG00000254973
Gene ExpressionLOC105375800 [ NCBI-GEO ]   LOC105375800 [ EBI - ARRAY_EXPRESS ]   LOC105375800 [ SEEK ]   LOC105375800 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105375800 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375800
GTEX Portal (Tissue expression)LOC105375800
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105375800
DMDM Disease mutations105375800
Blocks (Seattle)LOC105375800
Human Protein AtlasENSG00000254973
Protein Interaction databases
FunCoupENSG00000254973
BioGRIDLOC105375800
STRING (EMBL)LOC105375800
ZODIACLOC105375800
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105375800
BioCentury BCIQLOC105375800
ClinGenLOC105375800
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375800
Clinical trialLOC105375800
Miscellaneous
canSAR (ICR)LOC105375800 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105375800
EVEXLOC105375800
GoPubMedLOC105375800
iHOPLOC105375800
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:23:16 CET 2017

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