Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105376072 (uncharacterized LOC105376072)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105376072
Atlas_Id 76864
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 68541035 and ends at 68644442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105376072  105376072  uncharacterized LOC105376072
Aliases
GeneCards (Weizmann)LOC105376072
Ensembl hg19 (Hinxton)ENSG00000226337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226337 [Gene_View]  chr9:68541035-68644442 [Contig_View]  LOC105376072 [Vega]
ICGC DataPortalENSG00000226337
TCGA cBioPortalLOC105376072
AceView (NCBI)LOC105376072
Genatlas (Paris)LOC105376072
WikiGenes105376072
SOURCE (Princeton)LOC105376072
Genetics Home Reference (NIH)LOC105376072
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105376072  -     chr9:68541035-68644442 +  9q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105376072  -     9q21.11   [Description]    (hg19-Feb_2009)
EnsemblLOC105376072 - 9q21.11 [CytoView hg19]  LOC105376072 - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBILOC105376072 [Mapview hg19]  LOC105376072 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039548
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105376072
Cluster EST : UnigeneHs.665343 [ NCBI ]
CGAP (NCI)Hs.665343
Alternative Splicing GalleryENSG00000226337
Gene ExpressionLOC105376072 [ NCBI-GEO ]   LOC105376072 [ EBI - ARRAY_EXPRESS ]   LOC105376072 [ SEEK ]   LOC105376072 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105376072 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105376072
GTEX Portal (Tissue expression)LOC105376072
Human Protein AtlasENSG00000226337-LOC105376072 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105376072
DMDM Disease mutations105376072
Blocks (Seattle)LOC105376072
Human Protein Atlas [tissue]ENSG00000226337-LOC105376072 [tissue]
Protein Interaction databases
FunCoupENSG00000226337
BioGRIDLOC105376072
STRING (EMBL)LOC105376072
ZODIACLOC105376072
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105376072
BioCentury BCIQLOC105376072
ClinGenLOC105376072
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105376072
Clinical trialLOC105376072
Miscellaneous
canSAR (ICR)LOC105376072 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105376072
EVEXLOC105376072
GoPubMedLOC105376072
iHOPLOC105376072
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:54:47 CET 2017

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