Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105376382 (uncharacterized LOC105376382)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105376382
Atlas_Id 78089
Location 10p15.1  [Link to chromosome band 10p15]
Location_base_pair Starts at 5594985 and ends at 5596118 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105376382  105376382  uncharacterized LOC105376382
Aliases
GeneCards (Weizmann)LOC105376382
Ensembl hg19 (Hinxton)ENSG00000242147 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242147 [Gene_View]  chr10:5594985-5596118 [Contig_View]  LOC105376382 [Vega]
ICGC DataPortalENSG00000242147
TCGA cBioPortalLOC105376382
AceView (NCBI)LOC105376382
Genatlas (Paris)LOC105376382
WikiGenes105376382
SOURCE (Princeton)LOC105376382
Genetics Home Reference (NIH)LOC105376382
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105376382  -     chr10:5594985-5596118 -  10p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105376382  -     10p15.1   [Description]    (hg19-Feb_2009)
EnsemblLOC105376382 - 10p15.1 [CytoView hg19]  LOC105376382 - 10p15.1 [CytoView hg38]
Mapping of homologs : NCBILOC105376382 [Mapview hg19]  LOC105376382 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF218358 BG035368 CF130727
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105376382
Cluster EST : UnigeneHs.460282 [ NCBI ]
CGAP (NCI)Hs.460282
Alternative Splicing GalleryENSG00000242147
Gene ExpressionLOC105376382 [ NCBI-GEO ]   LOC105376382 [ EBI - ARRAY_EXPRESS ]   LOC105376382 [ SEEK ]   LOC105376382 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105376382 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105376382
GTEX Portal (Tissue expression)LOC105376382
Human Protein AtlasENSG00000242147-LOC105376382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105376382
DMDM Disease mutations105376382
Blocks (Seattle)LOC105376382
Human Protein Atlas [tissue]ENSG00000242147-LOC105376382 [tissue]
Protein Interaction databases
FunCoupENSG00000242147
BioGRIDLOC105376382
STRING (EMBL)LOC105376382
ZODIACLOC105376382
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105376382
BioCentury BCIQLOC105376382
ClinGenLOC105376382
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105376382
Clinical trialLOC105376382
Miscellaneous
canSAR (ICR)LOC105376382 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105376382
EVEXLOC105376382
GoPubMedLOC105376382
iHOPLOC105376382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:54:52 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.