Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105377671 (uncharacterized LOC105377671)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105377671
Atlas_Id 77900
Location 4q13.1  [Link to chromosome band 4q13]
Location_base_pair Starts at 58524515 and ends at 58536328 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105377671  105377671  uncharacterized LOC105377671
Aliases
GeneCards (Weizmann)LOC105377671
Ensembl hg19 (Hinxton)ENSG00000250340 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250340 [Gene_View]  chr4:58524515-58536328 [Contig_View]  LOC105377671 [Vega]
ICGC DataPortalENSG00000250340
TCGA cBioPortalLOC105377671
AceView (NCBI)LOC105377671
Genatlas (Paris)LOC105377671
WikiGenes105377671
SOURCE (Princeton)LOC105377671
Genetics Home Reference (NIH)LOC105377671
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105377671  -     chr4:58524515-58536328 -  4q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105377671  -     4q13.1   [Description]    (hg19-Feb_2009)
EnsemblLOC105377671 - 4q13.1 [CytoView hg19]  LOC105377671 - 4q13.1 [CytoView hg38]
Mapping of homologs : NCBILOC105377671 [Mapview hg19]  LOC105377671 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI873342 AW468836
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105377671
Cluster EST : UnigeneHs.735429 [ NCBI ]
CGAP (NCI)Hs.735429
Alternative Splicing GalleryENSG00000250340
Gene ExpressionLOC105377671 [ NCBI-GEO ]   LOC105377671 [ EBI - ARRAY_EXPRESS ]   LOC105377671 [ SEEK ]   LOC105377671 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105377671 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377671
GTEX Portal (Tissue expression)LOC105377671
Human Protein AtlasENSG00000250340-LOC105377671 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105377671
DMDM Disease mutations105377671
Blocks (Seattle)LOC105377671
Human Protein Atlas [tissue]ENSG00000250340-LOC105377671 [tissue]
Protein Interaction databases
FunCoupENSG00000250340
BioGRIDLOC105377671
STRING (EMBL)LOC105377671
ZODIACLOC105377671
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105377671
BioCentury BCIQLOC105377671
ClinGenLOC105377671
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377671
Clinical trialLOC105377671
Miscellaneous
canSAR (ICR)LOC105377671 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105377671
EVEXLOC105377671
GoPubMedLOC105377671
iHOPLOC105377671
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:55:05 CET 2017

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