Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105377924 (uncharacterized LOC105377924)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105377924
Atlas_Id 78035
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 106451496 and ends at 106457248 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105377924  105377924  uncharacterized LOC105377924
Aliases
GeneCards (Weizmann)LOC105377924
Ensembl hg19 (Hinxton)ENSG00000282408 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000282408 [Gene_View]  ENSG00000282408 [Sequence]  chr6:106451496-106457248 [Contig_View]  LOC105377924 [Vega]
ICGC DataPortalENSG00000282408
TCGA cBioPortalLOC105377924
AceView (NCBI)LOC105377924
Genatlas (Paris)LOC105377924
WikiGenes105377924
SOURCE (Princeton)LOC105377924
Genetics Home Reference (NIH)LOC105377924
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105377924  -     chr6:106451496-106457248 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105377924  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblLOC105377924 - 6q21 [CytoView hg19]  LOC105377924 - 6q21 [CytoView hg38]
Mapping of homologs : NCBILOC105377924 [Mapview hg19]  LOC105377924 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX105858
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105377924
Cluster EST : UnigeneHs.741855 [ NCBI ]
CGAP (NCI)Hs.741855
Alternative Splicing GalleryENSG00000282408
Gene ExpressionLOC105377924 [ NCBI-GEO ]   LOC105377924 [ EBI - ARRAY_EXPRESS ]   LOC105377924 [ SEEK ]   LOC105377924 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105377924 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377924
GTEX Portal (Tissue expression)LOC105377924
Human Protein AtlasENSG00000282408-LOC105377924 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105377924
DMDM Disease mutations105377924
Blocks (Seattle)LOC105377924
Human Protein Atlas [tissue]ENSG00000282408-LOC105377924 [tissue]
Protein Interaction databases
FunCoupENSG00000282408
BioGRIDLOC105377924
STRING (EMBL)LOC105377924
ZODIACLOC105377924
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105377924
BioCentury BCIQLOC105377924
ClinGenLOC105377924
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377924
Clinical trialLOC105377924
Miscellaneous
canSAR (ICR)LOC105377924 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105377924
EVEXLOC105377924
GoPubMedLOC105377924
iHOPLOC105377924
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:07:48 CEST 2018

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