Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC105378127 (uncharacterized LOC105378127)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378127
Atlas_Id 78205
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 167459260 and ends at 167472790 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105378127  105378127  uncharacterized LOC105378127
Aliases
GeneCards (Weizmann)LOC105378127
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:167459260-167472790 [Contig_View]  LOC105378127 [Vega]
TCGA cBioPortalLOC105378127
AceView (NCBI)LOC105378127
Genatlas (Paris)LOC105378127
WikiGenes105378127
SOURCE (Princeton)LOC105378127
Genetics Home Reference (NIH)LOC105378127
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105378127  -     chr6:167459260-167472790 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105378127  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblLOC105378127 - 6q27 [CytoView hg19]  LOC105378127 - 6q27 [CytoView hg38]
Mapping of homologs : NCBILOC105378127 [Mapview hg19]  LOC105378127 [Mapview hg38]
Gene and transcription
Genbank (Entrez)W78701
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105378127
Cluster EST : UnigeneHs.58456 [ NCBI ]
CGAP (NCI)Hs.58456
Gene ExpressionLOC105378127 [ NCBI-GEO ]   LOC105378127 [ EBI - ARRAY_EXPRESS ]   LOC105378127 [ SEEK ]   LOC105378127 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105378127 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378127
GTEX Portal (Tissue expression)LOC105378127
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105378127
DMDM Disease mutations105378127
Blocks (Seattle)LOC105378127
Protein Interaction databases
BioGRIDLOC105378127
STRING (EMBL)LOC105378127
ZODIACLOC105378127
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378127
BioCentury BCIQLOC105378127
ClinGenLOC105378127
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378127
Clinical trialLOC105378127
Miscellaneous
canSAR (ICR)LOC105378127 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105378127
EVEXLOC105378127
GoPubMedLOC105378127
iHOPLOC105378127
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:07:51 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.