Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105378349 (uncharacterized LOC105378349)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378349
Atlas_Id 77904
Location 10q22.1  [Link to chromosome band 10q22]
Location_base_pair Starts at 70939053 and ends at 70955641 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105378349  105378349  uncharacterized LOC105378349
Aliases
GeneCards (Weizmann)LOC105378349
Ensembl hg19 (Hinxton)ENSG00000259267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259267 [Gene_View]  chr10:70939053-70955641 [Contig_View]  LOC105378349 [Vega]
ICGC DataPortalENSG00000259267
TCGA cBioPortalLOC105378349
AceView (NCBI)LOC105378349
Genatlas (Paris)LOC105378349
WikiGenes105378349
SOURCE (Princeton)LOC105378349
Genetics Home Reference (NIH)LOC105378349
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105378349  -     chr10:70939053-70955641 +  10q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105378349  -     10q22.1   [Description]    (hg19-Feb_2009)
EnsemblLOC105378349 - 10q22.1 [CytoView hg19]  LOC105378349 - 10q22.1 [CytoView hg38]
Mapping of homologs : NCBILOC105378349 [Mapview hg19]  LOC105378349 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI201185 DB069022
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105378349
Cluster EST : UnigeneHs.119164 [ NCBI ]
CGAP (NCI)Hs.119164
Alternative Splicing GalleryENSG00000259267
Gene ExpressionLOC105378349 [ NCBI-GEO ]   LOC105378349 [ EBI - ARRAY_EXPRESS ]   LOC105378349 [ SEEK ]   LOC105378349 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105378349 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378349
GTEX Portal (Tissue expression)LOC105378349
Human Protein AtlasENSG00000259267-LOC105378349 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105378349
DMDM Disease mutations105378349
Blocks (Seattle)LOC105378349
Human Protein Atlas [tissue]ENSG00000259267-LOC105378349 [tissue]
Protein Interaction databases
FunCoupENSG00000259267
BioGRIDLOC105378349
STRING (EMBL)LOC105378349
ZODIACLOC105378349
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378349
BioCentury BCIQLOC105378349
ClinGenLOC105378349
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378349
Clinical trialLOC105378349
Miscellaneous
canSAR (ICR)LOC105378349 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105378349
EVEXLOC105378349
GoPubMedLOC105378349
iHOPLOC105378349
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:08:20 CET 2017

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