Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105378577 (uncharacterized LOC105378577)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 105378577
Atlas_Id 78791
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46284850 and ends at 46285997 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105378577    uncharacterized LOC105378577
Aliases
GeneCards (Weizmann)LOC105378577
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:46284850-46285997 [Contig_View]  LOC105378577 [Vega]
TCGA cBioPortalLOC105378577
AceView (NCBI)LOC105378577
Genatlas (Paris)LOC105378577
SOURCE (Princeton)LOC105378577
Genetics Home Reference (NIH)LOC105378577
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105378577  -     chr10:46284850-46285997 +  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105378577  -     10q11.22   [Description]    (hg19-Feb_2009)
GoldenPathLOC105378577 - 10q11.22 [CytoView hg19]  LOC105378577 - 10q11.22 [CytoView hg38]
Genome Data Viewer NCBILOC105378577 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC031882
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105378577
Gene ExpressionLOC105378577 [ NCBI-GEO ]   LOC105378577 [ EBI - ARRAY_EXPRESS ]   LOC105378577 [ SEEK ]   LOC105378577 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105378577 [ Firebrowse - Broad ]
GenevisibleExpression of LOC105378577 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105378577
GTEX Portal (Tissue expression)LOC105378577
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105378577
Protein Interaction databases
BioGRIDLOC105378577
STRING (EMBL)LOC105378577
ZODIACLOC105378577
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC105378577
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:04:56 CEST 2021

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